RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CCSER2Q9H7U1 834 aa22.5■■□□□ 1.19
PKP3-211ENST00000534401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.5■■□□□ 1.19
PKP3-211ENST00000534401 CLIC5Q9NZA1 410 aa22.5■■□□□ 1.19
PKP3-211ENST00000534401 HESX1Q9UBX0 185 aa22.5■■□□□ 1.19
PKP3-211ENST00000534401 MRPS17Q9Y2R5 130 aaKnown RBP22.5■■□□□ 1.19
PKP3-211ENST00000534401 CPQQ9Y646 472 aa22.5■■□□□ 1.19
PKP3-211ENST00000534401 LRRC10BA6NIK2 292 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 FAM170BA6NMN3 283 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 CYP26A1O43174 497 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 GABBR2O75899 941 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 ZNF18P17022 549 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 CTHP32929 405 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 MAGEA9P43362 315 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 RPS9P46781 194 aaKnown RBP22.49■■□□□ 1.19
PKP3-211ENST00000534401 RPL34P49207 117 aaKnown RBP22.49■■□□□ 1.19
PKP3-211ENST00000534401 TYRO3Q06418 890 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 TCF15Q12870 199 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 KLHL40Q2TBA0 621 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 EML3Q32P44 896 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 HSP90AA4PQ58FG1 418 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 BHLHA9Q7RTU4 235 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 DDX42Q86XP3 938 aaKnown RBP eCLIP22.49■■□□□ 1.19
PKP3-211ENST00000534401 DTWD2Q8NBA8 298 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 FANCLQ9NW38 375 aa22.49■■□□□ 1.19
PKP3-211ENST00000534401 SPECC1L-ADORA2AF8WAN1 911 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 STK25O00506 426 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 TLR5O60602 858 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 ABL1P00519 1130 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 SLC8A3P57103 927 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 MYL5Q02045 173 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 CC2D1AQ6P1N0 951 aaPredicted RBP22.48■■□□□ 1.19
PKP3-211ENST00000534401 TXNDC11Q6PKC3 985 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 MAMSTRQ6ZN01 415 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 FAM3CQ92520 227 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 FUCA2Q9BTY2 467 aa22.48■■□□□ 1.19
PKP3-211ENST00000534401 AJAP1Q9UKB5 411 aaPredicted RBP22.48■■□□□ 1.19
PKP3-211ENST00000534401 A0A1W2PQH9 124 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 E2F8A0AVK6 867 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 GREM1O60565 184 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 DCNP07585 359 aaKnown RBP22.47■■□□□ 1.19
PKP3-211ENST00000534401 MBL2P11226 248 aaPredicted RBP22.47■■□□□ 1.19
PKP3-211ENST00000534401 ARSAP15289 507 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 BRD2P25440 801 aaKnown RBP22.47■■□□□ 1.19
PKP3-211ENST00000534401 KRT31Q15323 416 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 TRIM68Q6AZZ1 485 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 UBA3Q8TBC4 463 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 BPIFA3Q9BQP9 254 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 KLF16Q9BXK1 252 aaPredicted RBP22.47■■□□□ 1.19
PKP3-211ENST00000534401 LINC00597Q9H2U6 94 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 EBF3Q9H4W6 596 aa22.47■■□□□ 1.19
PKP3-211ENST00000534401 DUS2Q9NX74 493 aaKnown RBP22.47■■□□□ 1.19
PKP3-211ENST00000534401 LIMA1Q9UHB6 759 aaKnown RBP22.47■■□□□ 1.19
PKP3-211ENST00000534401 MYOFQ9NZM1 2061 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 CALCAP01258 141 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 CHRNB1P11230 501 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 HOXD11P31277 338 aaPredicted RBP22.46■■□□□ 1.19
PKP3-211ENST00000534401 GPD2P43304 727 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 SOX9P48436 509 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 TKTL1P51854 596 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 KPNA1P52294 538 aaPredicted RBP22.46■■□□□ 1.19
PKP3-211ENST00000534401 UBXN2BQ14CS0 331 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 CAVIN1Q6NZI2 390 aaKnown RBP22.46■■□□□ 1.19
PKP3-211ENST00000534401 PMF1Q6P1K2 205 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 APTXQ7Z2E3 356 aaKnown RBP22.46■■□□□ 1.19
PKP3-211ENST00000534401 ADGRG2Q8IZP9 1017 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 ZNF606Q8WXB4 792 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 HSFY1Q96LI6 401 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 NAA15Q9BXJ9 866 aaKnown RBP22.46■■□□□ 1.19
PKP3-211ENST00000534401 ECT2Q9H8V3 914 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 PLCB1Q9NQ66 1216 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 DNAJC12Q9UKB3 198 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 WNT6Q9Y6F9 365 aa22.46■■□□□ 1.19
PKP3-211ENST00000534401 NCAM2O15394 837 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 TBX18O95935 607 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 ZBED1O96006 694 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 RARGP13631 454 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 RFX1P22670 979 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 ATP5C1P36542 298 aaKnown RBP22.45■■□□□ 1.18
PKP3-211ENST00000534401 IFNAR2P48551 515 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 PTPN5P54829 565 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 KLHDC7AQ5VTJ3 777 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 ARHGAP18Q8N392 663 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 STK32AQ8WU08 396 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 ATP2A3Q93084 1043 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 ULBP1Q9BZM6 244 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 CNGB3Q9NQW8 809 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 SMPD4Q9NXE4 827 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 TAB2Q9NYJ8 693 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 CFAP97Q9P2B7 532 aa22.45■■□□□ 1.18
PKP3-211ENST00000534401 FOXN3O00409 490 aaPredicted RBP22.44■■□□□ 1.18
PKP3-211ENST00000534401 TRDMT1O14717 391 aaKnown RBP22.44■■□□□ 1.18
PKP3-211ENST00000534401 SLC9A3R1O14745 358 aaPredicted RBP22.44■■□□□ 1.18
PKP3-211ENST00000534401 KRT5P13647 590 aa22.44■■□□□ 1.18
PKP3-211ENST00000534401 GAB4Q2WGN9 574 aa22.44■■□□□ 1.18
PKP3-211ENST00000534401 HTR3DQ70Z44 454 aa22.44■■□□□ 1.18
PKP3-211ENST00000534401 FAM71AQ8IYT1 594 aa22.44■■□□□ 1.18
PKP3-211ENST00000534401 SECISBP2LQ93073 1101 aaKnown RBP22.44■■□□□ 1.18
PKP3-211ENST00000534401 WBP2Q969T9 261 aa22.44■■□□□ 1.18
PKP3-211ENST00000534401 OTUB2Q96DC9 234 aa22.44■■□□□ 1.18
PKP3-211ENST00000534401 CDK5RAP1Q96SZ6 601 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms