RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 C3orf20Q8ND61 904 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 OR9Q1Q8NGQ5 310 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 KLRG1Q96E93 195 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 ATP11BQ9Y2G3 1177 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 MFSD7Q6UXD7 560 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 LINC00523Q86TU6 105 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 STKLD1Q8NE28 680 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 SHC3Q92529 594 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 E2F7Q96AV8 911 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 DNAJC18Q9H819 358 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 NDFIP2Q9NV92 336 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 L3MBTL1Q9Y468 752 aa17.83■□□□□ 0.44
PHRF1-206ENST00000534320 SLC2A3P11169 496 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 PGM1P36871 562 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 CLK2P49760 499 aaKnown RBP17.82■□□□□ 0.44
PHRF1-206ENST00000534320 RTP1P59025 263 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 TMEM154Q6P9G4 183 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 HIC2Q96JB3 615 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 LSM7Q9UK45 103 aaKnown RBP17.82■□□□□ 0.44
PHRF1-206ENST00000534320 ANXA9O76027 345 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 SERPINB3P29508 390 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 CAPSQ13938 189 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 IQSEC1Q6DN90 963 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 CALML6Q8TD86 181 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 E2F8A0AVK6 867 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 RIPK2O43353 540 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 GJB6O95452 261 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 OLFML2BQ68BL8 750 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 CCDC90BQ9GZT6 254 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 ADA2Q9NZK5 511 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 MTO1Q9Y2Z2 717 aaKnown RBP17.82■□□□□ 0.44
PHRF1-206ENST00000534320 PRRG1O14668 218 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 PCSK9Q8NBP7 692 aaKnown RBP17.82■□□□□ 0.44
PHRF1-206ENST00000534320 RPS6KL1Q9Y6S9 549 aa17.82■□□□□ 0.44
PHRF1-206ENST00000534320 NCANO14594 1321 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 MYL2P10916 166 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 KCNA3P22001 575 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 TKTL1P51854 596 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 DDIASQ8IXT1 998 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 TBCBQ99426 244 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 TSR3Q9UJK0 312 aaKnown RBP17.81■□□□□ 0.44
PHRF1-206ENST00000534320 MROH7Q68CQ1 1323 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 AXLP30530 894 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 TDRD10Q5VZ19 366 aaKnown RBP17.81■□□□□ 0.44
PHRF1-206ENST00000534320 CCNJLQ8IV13 435 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 AGGF1Q8N302 714 aaeCLIP17.81■□□□□ 0.448e-7■□□□□ 10.2
PHRF1-206ENST00000534320 INPP4AQ96PE3 977 aaPredicted RBP17.81■□□□□ 0.44
PHRF1-206ENST00000534320 DSEQ9UL01 958 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 SHOC2Q9UQ13 582 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 CALCAP01258 141 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 CYP1A2P05177 515 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 CYP2F1P24903 491 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 IMPG1Q17R60 797 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 FAM111AQ96PZ2 611 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 COLEC11Q9BWP8 271 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 SDR42E2A6NKP2 422 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 TLR2O60603 784 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 E2F6O75461 281 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 CYBBP04839 570 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 ZDHHC17Q8IUH5 632 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 ATP6V0D2Q8N8Y2 350 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 PAFAH2Q99487 392 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 DIABLOQ9NR28 239 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 DDX43Q9NXZ2 648 aaKnown RBP17.81■□□□□ 0.44
PHRF1-206ENST00000534320 TNFSF13BQ9Y275 285 aa17.81■□□□□ 0.44
PHRF1-206ENST00000534320 MANSC4A6NHS7 340 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 PDAP1Q13442 181 aaKnown RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 CHI3L2Q15782 390 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 PPP1R36Q96LQ0 422 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 MTG1Q9BT17 334 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 MUC3BQ9H195 1237 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 CASTOR2A6NHX0 329 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 NEMP1O14524 444 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 HMGCRP04035 888 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 HARS2P49590 506 aaKnown RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 ERMARDQ5T6L9 678 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 TAF2Q6P1X5 1199 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 LRRC8BQ6P9F7 803 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 C12orf56Q8IXR9 622 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 GANCQ8TET4 914 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 GPBP1L1Q9HC44 474 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 FARP1Q9Y4F1 1045 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 RGPD1P0DJD0 1748 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 DNALI1O14645 258 aaPredicted RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 TGM2P21980 687 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 MAP4P27816 1152 aaKnown RBP17.8■□□□□ 0.44
PHRF1-206ENST00000534320 ETFBP38117 255 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 SERPINB4P48594 390 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 PSEN2P49810 448 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 MAPRE2Q15555 327 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 NFIL3Q16649 462 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 FAM117BQ6P1L5 589 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 PLPPR4Q7Z2D5 763 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 KATNAL2Q8IYT4 538 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 SYT15Q9BQS2 421 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 IKZF4Q9H2S9 585 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 PIDD1Q9HB75 910 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 SLC39A10Q9ULF5 831 aa17.8■□□□□ 0.44
PHRF1-206ENST00000534320 ZNF263O14978 683 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms