RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 MYLPFQ96A32 169 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 TMEM209Q96SK2 561 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 KCNK16Q96T55 309 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 KRT12Q99456 494 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 LHX5Q9H2C1 402 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 ASIC3Q9UHC3 531 aa10.02□□□□□ -0.8
RTL1-201ENST00000534062 ZMYND8Q9ULU4 1186 aaPredicted RBP10.02□□□□□ -0.8
RTL1-201ENST00000534062 LRRD1A4D1F6 860 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 RTN3O95197 1032 aaPredicted RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 KRT1P04264 644 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 PYGBP11216 843 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 CNKSR3Q6P9H4 555 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 SPATS2Q86XZ4 545 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 ZNF473Q8WTR7 871 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 CLEC4CQ8WTT0 213 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 MRPL9Q9BYD2 267 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 WDR35Q9P2L0 1181 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 TBX21Q9UL17 535 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 TLDC2A0PJX2 215 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 MIF4GDA9UHW6 222 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 SMNDC1O75940 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
RTL1-201ENST00000534062 AMHP03971 560 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 SLC11A1P49279 550 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 SKOR1P84550 965 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 SH2D3CQ8N5H7 860 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 DPF3Q92784 378 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 STAMBPL1Q96FJ0 436 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 PIWIL1Q96J94 861 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 PBKQ96KB5 322 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 CRTAC1Q9NQ79 661 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 HOMER3Q9NSC5 361 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 DSEQ9UL01 958 aa10.02□□□□□ -0.81
RTL1-201ENST00000534062 UTP11Q9Y3A2 253 aaKnown RBP10.02□□□□□ -0.81
RTL1-201ENST00000534062 PROSCO94903 275 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 PARNO95453 639 aaKnown RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 NPR3P17342 541 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SDC4P31431 198 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SEC24CP53992 1094 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 DEFB103AP81534 67 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SLC7A5Q01650 507 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SDHAF4Q5VUM1 108 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 C11orf63Q6NUN7 778 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 FAM35AQ86V20 835 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 XYLT1Q86Y38 959 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 LRRC43Q8N309 656 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 ANKLE1Q8NAG6 615 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 STKLD1Q8NE28 680 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 ALG3Q92685 438 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 RPGRIP1Q96KN7 1286 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 CDH9Q9ULB4 789 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SMIM23A6NLE4 172 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 ITGB8P26012 769 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 TKTL1P51854 596 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 DYNLT1P63172 113 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 GUCY1A3Q02108 690 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 HADHQ16836 314 aaKnown RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 C15orf59Q2T9L4 293 aaPredicted RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 ATP13A4Q4VNC1 1196 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 PLEKHA7Q6IQ23 1121 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 CREG2Q8IUH2 290 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 COLGALT2Q8IYK4 626 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 CRYBG2Q8N1P7 616 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SPATA4Q8NEY3 305 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 TMEM169Q96HH4 297 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 CALN1Q9BXU9 219 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 NACA2Q9H009 215 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 IKBKGQ9Y6K9 419 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SCN5AQ14524 2016 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SETSIPP0DME0 302 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 LSP1P33241 339 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 C6orf89Q6UWU4 347 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 RHOT1Q8IXI2 618 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 IFT20Q8IY31 132 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 EZH1Q92800 747 aaPredicted RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 HAUS1Q96CS2 278 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 CFAP57Q96MR6 1250 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 SEPT5Q99719 369 aaPredicted RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 FAM118BQ9BPY3 351 aa10.01□□□□□ -0.81
RTL1-201ENST00000534062 DDX47Q9H0S4 455 aaKnown RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 RBM12Q9NTZ6 932 aaKnown RBP10.01□□□□□ -0.81
RTL1-201ENST00000534062 BEST1O76090 585 aa10□□□□□ -0.81
RTL1-201ENST00000534062 NDUFV1P49821 464 aa10□□□□□ -0.81
RTL1-201ENST00000534062 FAM189BP81408 668 aa10□□□□□ -0.81
RTL1-201ENST00000534062 NME3Q13232 169 aa10□□□□□ -0.81
RTL1-201ENST00000534062 DCAF6Q58WW2 860 aa10□□□□□ -0.81
RTL1-201ENST00000534062 CFAP58Q5T655 872 aa10□□□□□ -0.81
RTL1-201ENST00000534062 SUSD3Q96L08 255 aa10□□□□□ -0.81
RTL1-201ENST00000534062 GPR62Q9BZJ7 368 aa10□□□□□ -0.81
RTL1-201ENST00000534062 BATF3Q9NR55 127 aa10□□□□□ -0.81
RTL1-201ENST00000534062 TIMP1P01033 207 aa10□□□□□ -0.81
RTL1-201ENST00000534062 IFNB1P01574 187 aa10□□□□□ -0.81
RTL1-201ENST00000534062 COL6A1P12109 1028 aa10□□□□□ -0.81
RTL1-201ENST00000534062 GPD1P21695 349 aa10□□□□□ -0.81
RTL1-201ENST00000534062 TAS2R40P59535 323 aa10□□□□□ -0.81
RTL1-201ENST00000534062 ZNF268Q14587 947 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms