RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 EXOC5O00471 708 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 TPD52L2O43399 206 aaKnown RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 GRPP07492 148 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 PAX7P23759 505 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 LRPAP1P30533 357 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 ABCD1P33897 745 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 WNT3P56703 355 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 FOXF2Q12947 444 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 BIRC2Q13490 618 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 PDCD2Q16342 344 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 FILIP1LQ4L180 1135 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 C1QTNF12Q5T7M4 302 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 CCDC181Q5TID7 509 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 SLC29A4Q7RTT9 530 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 RASAL3Q86YV0 1011 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 FMNL3Q8IVF7 1028 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 CAMKK1Q8N5S9 505 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 DIS3LQ8TF46 1054 aaKnown RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 SYAP1Q96A49 352 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 INO80BQ9C086 356 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 SEMA4CQ9C0C4 833 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 SLC12A5Q9H2X9 1139 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 DIAPH3Q9NSV4 1193 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 CWC25Q9NXE8 425 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 STK26Q9P289 416 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 ZNF180Q9UJW8 692 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 JRKLQ9Y4A0 524 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 IQGAP3Q86VI3 1631 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 ANKRD50Q9ULJ7 1429 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 KANK1Q14678 1352 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 TMEM2Q9UHN6 1383 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 TMEM131LA2VDJ0 1609 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 A0A088AWK7 358 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 LINC01548A6NM66 108 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 RFPL1O75677 317 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 DNAJB5O75953 348 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 JTBO76095 146 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 UNC5CO95185 931 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 ALDH2P05091 517 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 FAM163BP0C2L3 166 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 ELFN1P0C7U0 828 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 USP8P40818 1118 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 PROK1P58294 105 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 MCL1Q07820 350 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 TMED1Q13445 227 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 E2F2Q14209 437 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 LLGL1Q15334 1064 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 VPS53Q5VIR6 699 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 AMIGO2Q86SJ2 522 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 DAAM2Q86T65 1068 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 TXLNBQ8N3L3 684 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 SEMA6DQ8NFY4 1073 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 RP9Q8TA86 221 aaKnown RBP4.8□□□□□ -1.64
ITGB1-219ENST00000534049 KBTBD7Q8WVZ9 684 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 CFAP53Q96M91 514 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 RHOBTB2Q9BYZ6 727 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 MRPS18AQ9NVS2 196 aaKnown RBP4.8□□□□□ -1.64
ITGB1-219ENST00000534049 FLRT1Q9NZU1 646 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 ST3GAL5Q9UNP4 418 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 TMX2Q9Y320 296 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 RPS6KL1Q9Y6S9 549 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 MORC2Q9Y6X9 1032 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-219ENST00000534049 GCC2Q8IWJ2 1684 aa4.8□□□□□ -1.64
ITGB1-219ENST00000534049 ANKRD30AQ9BXX3 1397 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 NRXN3Q9Y4C0 1643 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 IL16Q14005 1332 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 TMCO5BA8MYB1 307 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 TARM1B6A8C7 271 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 QSOX1O00391 747 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 PPM1DO15297 605 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 AP1G1O43747 822 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 BAG4O95429 457 aaKnown RBP4.79□□□□□ -1.64
ITGB1-219ENST00000534049 HNRNPCP07910 306 aaKnown RBP eCLIP4.79□□□□□ -1.646e-6■■■■□ 19.3
ITGB1-219ENST00000534049 HDCP19113 662 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 MAP2K2P36507 400 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 RWDD2BP57060 319 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 RAB1AP62820 205 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 GPSM2P81274 684 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 CCDC30Q5VVM6 783 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 TTLL5Q6EMB2 1281 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 MTHFD1LQ6UB35 978 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 PCSK9Q8NBP7 692 aaKnown RBP4.79□□□□□ -1.64
ITGB1-219ENST00000534049 ANKRD20A12PQ8NF67 263 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 STAG1Q8WVM7 1258 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 JPH3Q8WXH2 748 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-219ENST00000534049 ANKRD7Q92527 254 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 ANKS1AQ92625 1134 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 RMDN2Q96LZ7 410 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 PANK2Q9BZ23 570 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 CDH19Q9H159 772 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 GLOD4Q9HC38 313 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 PCDHA6Q9UN73 950 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 E9PCH4 1651 aa4.79□□□□□ -1.64
ITGB1-219ENST00000534049 ROCK1Q13464 1354 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 AKAP10O43572 662 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 DLDP09622 509 aaKnown RBP4.78□□□□□ -1.64
ITGB1-219ENST00000534049 TSPY4P0CV99 314 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 TSPY10P0CW01 314 aa4.78□□□□□ -1.64
ITGB1-219ENST00000534049 VDRP11473 427 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms