RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CHADO15335 359 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 TLR5O60602 858 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 OLFM2O95897 454 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 TPM2P07951 284 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 IRF1P10914 325 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 RARGP13631 454 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 GPD2P43304 727 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 SLC8A3P57103 927 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 POLR2FP61218 127 aaKnown RBP14.09□□□□□ -0.15
CMTM1-219ENST00000533953 MTF1Q14872 753 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 SNX30Q5VWJ9 437 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 NAIF1Q69YI7 327 aaPredicted RBP14.09□□□□□ -0.15
CMTM1-219ENST00000533953 BHLHA9Q7RTU4 235 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 OVCA2Q8WZ82 227 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 IRF7Q92985 503 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 ZFRQ96KR1 1074 aaKnown RBP14.09□□□□□ -0.15
CMTM1-219ENST00000533953 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
CMTM1-219ENST00000533953 FAM83CQ9BQN1 747 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 MIS12Q9H081 205 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 PNPLA8Q9NP80 782 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 HPS4Q9NQG7 708 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 TLR8Q9NR97 1041 aaKnown RBP14.09□□□□□ -0.15
CMTM1-219ENST00000533953 OBP2AQ9NY56 170 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 TJP2Q9UDY2 1190 aa14.09□□□□□ -0.15
CMTM1-219ENST00000533953 GREB1Q4ZG55 1949 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 YJEFN3A6XGL0 299 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 SOBPA7XYQ1 873 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 E7ENQ6 273 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 ZBED1O96006 694 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 DCNP07585 359 aaKnown RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 SETSIPP0DME0 302 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 AVPR2P30518 371 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 PLA2G4AP47712 749 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 SLC7A9P82251 487 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 PFKPQ01813 784 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 USP4Q13107 963 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 ZNF268Q14587 947 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 TAF3Q5VWG9 929 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 CC2D1AQ6P1N0 951 aaPredicted RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 TXNDC11Q6PKC3 985 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 SUGP1Q8IWZ8 645 aaKnown RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 FAM71AQ8IYT1 594 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 WDTC1Q8N5D0 677 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 ANKRD20A12PQ8NF67 263 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 CSGALNACT1Q8TDX6 532 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 EDEM1Q92611 657 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 NACA2Q9H009 215 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 ST7Q9NRC1 585 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 THG1LQ9NWX6 298 aaKnown RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 ZMYM5Q9UJ78 669 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 NDRG2Q9UN36 371 aaKnown RBP14.08□□□□□ -0.16
CMTM1-219ENST00000533953 PIAS3Q9Y6X2 628 aa14.08□□□□□ -0.16
CMTM1-219ENST00000533953 FAM170BA6NMN3 283 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 GFPT2O94808 682 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 RFX1P22670 979 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 STARD6P59095 220 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 YWHAGP61981 247 aaKnown RBP eCLIP14.07□□□□□ -0.16
CMTM1-219ENST00000533953 UBXN2BQ14CS0 331 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 C10orf120Q5SQS8 335 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 PM20D1Q6GTS8 502 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 ASTLQ6HA08 431 aaPredicted RBP14.07□□□□□ -0.16
CMTM1-219ENST00000533953 MIB1Q86YT6 1006 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 SCUBE3Q8IX30 993 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 SIX6OS1Q8N1H7 587 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 KCTD13Q8WZ19 329 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 FAM81BQ96LP2 452 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 KLF16Q9BXK1 252 aaPredicted RBP14.07□□□□□ -0.16
CMTM1-219ENST00000533953 STK33Q9BYT3 514 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 KIF9Q9HAQ2 790 aa14.07□□□□□ -0.16
CMTM1-219ENST00000533953 RTN4Q9NQC3 1192 aaKnown RBP14.07□□□□□ -0.16
CMTM1-219ENST00000533953 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
CMTM1-219ENST00000533953 F8VZ95 297 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 HMBSP08397 361 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 GLULP15104 373 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 COL9A1P20849 921 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 TARSP26639 723 aaKnown RBP14.06□□□□□ -0.16
CMTM1-219ENST00000533953 ATP5C1P36542 298 aaKnown RBP14.06□□□□□ -0.16
CMTM1-219ENST00000533953 DAOAP59103 153 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 PTK2Q05397 1052 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 EFEMP1Q12805 493 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 RUNX3Q13761 415 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 STILQ15468 1287 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 BSPRYQ5W0U4 402 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
CMTM1-219ENST00000533953 OSCP1Q8WVF1 389 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 DNASE1L2Q92874 299 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 CHFRQ96EP1 664 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 CYLDQ9NQC7 956 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 RASAL2Q9UJF2 1139 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 ZDBF2Q9HCK1 2354 aa14.06□□□□□ -0.16
CMTM1-219ENST00000533953 KANSL1LA0AUZ9 987 aa14.05□□□□□ -0.16
CMTM1-219ENST00000533953 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
CMTM1-219ENST00000533953 MED7O43513 233 aa14.05□□□□□ -0.16
CMTM1-219ENST00000533953 RALAP11233 206 aa14.05□□□□□ -0.16
CMTM1-219ENST00000533953 CYP11B1P15538 503 aa14.05□□□□□ -0.16
CMTM1-219ENST00000533953 PFKLP17858 780 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms