RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SLC5A3P53794 718 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 DLG4P78352 724 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 GAD2Q05329 585 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 ORC1Q13415 861 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 HSF5Q4G112 596 aaPredicted RBP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 EOGTQ5NDL2 527 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 SCARA5Q6ZMJ2 495 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 ACOT1Q86TX2 421 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 DDX42Q86XP3 938 aaKnown RBP eCLIP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 MIB1Q86YT6 1006 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 PDZD8Q8NEN9 1154 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 HMGB4Q8WW32 186 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 SMOQ99835 787 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 MED10Q9BTT4 135 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 DMAC2Q9NW81 257 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 RALYQ9UKM9 306 aaKnown RBP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 CIZ1Q9ULV3 898 aaPredicted RBP19.13■□□□□ 0.65
UBXN1-216ENST00000533908 PCDHA7Q9UN72 937 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 GON4LQ3T8J9 2241 aa19.13■□□□□ 0.65
UBXN1-216ENST00000533908 TNRC6BQ9UPQ9 1833 aaKnown RBP19.12■□□□□ 0.65
UBXN1-216ENST00000533908 C1QTNF9BB2RNN3 333 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 KLRC4O43908 158 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 C1QTNF9P0C862 333 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 STK4Q13043 487 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 BIRC3Q13489 604 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 NCOA4Q13772 614 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 ZNF699Q32M78 642 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 ZNF667Q5HYK9 610 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 LPCAT2Q7L5N7 544 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 WHAMMQ8TF30 809 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 OTUB2Q96DC9 234 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 POLMQ9NP87 494 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-216ENST00000533908 DMAP1Q9NPF5 467 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-216ENST00000533908 SPHK2Q9NRA0 654 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 CGNQ9P2M7 1197 aaKnown RBP19.12■□□□□ 0.65
UBXN1-216ENST00000533908 HMGXB4Q9UGU5 601 aa19.12■□□□□ 0.65
UBXN1-216ENST00000533908 TCRBV21S2A2A0A5A6 115 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 TBC1D3BA6NDS4 549 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 HOXC11O43248 304 aaPredicted RBP19.11■□□□□ 0.65
UBXN1-216ENST00000533908 MAP3K13O43283 966 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 AP1G2O75843 785 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 TBX18O95935 607 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 PROS1P07225 676 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 IRF1P10914 325 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 CCDC130P13994 396 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 CSRP1P21291 193 aaKnown RBP19.11■□□□□ 0.65
UBXN1-216ENST00000533908 ZNF252P-AS1Q0IIN9 211 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 FOXC1Q12948 553 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 UAP1L1Q3KQV9 507 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 TRIM61Q5EBN2 209 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 RESP18Q5W5W9 173 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 CRYBG2Q8N1P7 616 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 DEFB119Q8N690 84 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 SMARCD1Q96GM5 515 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 DUSP9Q99956 384 aaKnown RBP19.11■□□□□ 0.65
UBXN1-216ENST00000533908 KRT82Q9NSB4 513 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 BCCIPQ9P287 314 aaKnown RBP eCLIP19.11■□□□□ 0.65
UBXN1-216ENST00000533908 DEC1Q9P2X7 70 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 EVLQ9UI08 416 aaPredicted RBP19.11■□□□□ 0.65
UBXN1-216ENST00000533908 SH3BP1Q9Y3L3 701 aa19.11■□□□□ 0.65
UBXN1-216ENST00000533908 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.1■□□□□ 0.65
UBXN1-216ENST00000533908 CEACAM1P13688 526 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 GABRG2P18507 467 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 WASP42768 502 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 TUBP50607 506 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 SYT12Q8IV01 421 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 PGBD3Q8N328 593 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 C12orf29Q8N999 325 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 KIAA0895Q8NCT3 520 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 DEFB124Q8NES8 71 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 SLC2A14Q8TDB8 520 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 TNIP3Q96KP6 325 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 ACOX2Q99424 681 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 KLF16Q9BXK1 252 aaPredicted RBP19.1■□□□□ 0.65
UBXN1-216ENST00000533908 TMEM121BQ9BXQ6 578 aaPredicted RBP19.1■□□□□ 0.65
UBXN1-216ENST00000533908 MAGEF1Q9HAY2 307 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 CSNK1G1Q9HCP0 422 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 CD248Q9HCU0 757 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 FSCN3Q9NQT6 498 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 COMMD8Q9NX08 183 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 OSER1Q9NX31 292 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 SERTAD1Q9UHV2 236 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 PILRBQ9UKJ0 227 aa19.1■□□□□ 0.65
UBXN1-216ENST00000533908 ASCC3Q8N3C0 2202 aaKnown RBP19.1■□□□□ 0.65
UBXN1-216ENST00000533908 ATP8B3O60423 1300 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 ATXN2Q99700 1313 aaKnown RBP19.09■□□□□ 0.65
UBXN1-216ENST00000533908 ITPKAP23677 461 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 NDST1P52848 882 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 AP3M2P53677 418 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 MAP3K7CLP57077 242 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 ANO4Q32M45 955 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 C10orf76Q5T2E6 689 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 BTBD8Q5XKL5 378 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 SPOPLQ6IQ16 392 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 HTR3DQ70Z44 454 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 GPRIN1Q7Z2K8 1008 aa19.09■□□□□ 0.65
UBXN1-216ENST00000533908 ZNF513Q8N8E2 541 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms