RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 RHBDF2Q6PJF5 856 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 WHAMMQ8TF30 809 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 EZH1Q92800 747 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-211ENST00000533492 SEMA4DQ92854 862 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 OTUB2Q96DC9 234 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 HHIPQ96QV1 700 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 PNKPQ96T60 521 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 POLR3BQ9NW08 1133 aaPredicted RBP16.31■□□□□ 0.2
CPSF1-211ENST00000533492 SCML2Q9UQR0 700 aa16.31■□□□□ 0.2
CPSF1-211ENST00000533492 PRR5-ARHGAP8B1AHC4 643 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 AXIN1O15169 862 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 RPP40O75818 363 aaKnown RBP16.3■□□□□ 0.2
CPSF1-211ENST00000533492 APODP05090 189 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 IRF1P10914 325 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 ADH5P11766 374 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 ATP5C1P36542 298 aaKnown RBP16.3■□□□□ 0.2
CPSF1-211ENST00000533492 SLC6A11P48066 632 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 ARHGAP8P85298 464 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 GAD2Q05329 585 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 DMC1Q14565 340 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 LY6G5CQ5SRR4 150 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
CPSF1-211ENST00000533492 BTBD8Q5XKL5 378 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 GAB3Q8WWW8 586 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 ZFRQ96KR1 1074 aaKnown RBP16.3■□□□□ 0.2
CPSF1-211ENST00000533492 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 PNPLA8Q9NP80 782 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 ARMCX3Q9UH62 379 aaPredicted RBP16.3■□□□□ 0.2
CPSF1-211ENST00000533492 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
CPSF1-211ENST00000533492 SDK1Q7Z5N4 2213 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-211ENST00000533492 HHLA1C9JL84 531 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 K7EQS6 105 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 PSMA7O14818 248 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 LRP3O75074 770 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 APBB3O95704 486 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 TBX18O95935 607 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 EIF2DP41214 584 aaKnown RBP16.29■□□□□ 0.2
CPSF1-211ENST00000533492 PGFP49763 221 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 PMS1P54277 932 aaKnown RBP16.29■□□□□ 0.2
CPSF1-211ENST00000533492 GAB4Q2WGN9 574 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 GPRIN1Q7Z2K8 1008 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 DGLUCYQ7Z3D6 616 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 CACNA2D4Q7Z3S7 1137 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 FAM160A2Q8N612 972 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-211ENST00000533492 USP33Q8TEY7 942 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 TATDN2Q93075 761 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-211ENST00000533492 PARD6AQ9NPB6 346 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 RALGAPA1Q6GYQ0 2036 aa16.29■□□□□ 0.2
CPSF1-211ENST00000533492 TRIM49BA6NDI0 452 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 CYP26A1O43174 497 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 KAT7O95251 611 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 RARGP13631 454 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 TGM1P22735 817 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 PPP1R2P41236 205 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 PSEN1P49768 467 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 KIF11P52732 1056 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 SLC8A3P57103 927 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 MRPS21P82921 87 aaKnown RBP16.28■□□□□ 0.2
CPSF1-211ENST00000533492 ANO4Q32M45 955 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 TADA2BQ86TJ2 420 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 BBS7Q8IWZ6 715 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 ELOA2Q8IYF1 753 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-211ENST00000533492 TSTD1Q8NFU3 115 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-211ENST00000533492 METTL14Q9HCE5 456 aaKnown RBP16.28■□□□□ 0.2
CPSF1-211ENST00000533492 CYLDQ9NQC7 956 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 SEMA4GQ9NTN9 838 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 DLL3Q9NYJ7 618 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 NAGPAQ9UK23 515 aa16.28■□□□□ 0.2
CPSF1-211ENST00000533492 LSM7Q9UK45 103 aaKnown RBP16.28■□□□□ 0.2
CPSF1-211ENST00000533492 CDV3Q9UKY7 258 aaKnown RBP16.28■□□□□ 0.2
CPSF1-211ENST00000533492 DMXL1Q9Y485 3027 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 CEP250Q9BV73 2442 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 A0A1W2PQH9 124 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 RALAP11233 206 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 GRIA2P42262 883 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 DGKEP52429 567 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 RAD23BP54727 409 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
CPSF1-211ENST00000533492 PREPLQ4J6C6 727 aaPredicted RBP16.27■□□□□ 0.2
CPSF1-211ENST00000533492 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 NUDT18Q6ZVK8 323 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 HTR3DQ70Z44 454 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 C12orf40Q86WS4 652 aa16.27■□□□□ 0.2
CPSF1-211ENST00000533492 ZC3H3Q8IXZ2 948 aaKnown RBP16.27■□□□□ 0.2
CPSF1-211ENST00000533492 CCDC33Q8N5R6 958 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms