RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ZRANB2O95218 330 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMPD1-208ENST00000533123 DDR2Q16832 855 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 PPP2R2DQ66LE6 453 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 CCDC70Q6NSX1 233 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 GPRIN1Q7Z2K8 1008 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 ARFGAP3Q9NP61 516 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 TLR9Q9NR96 1032 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 STRIP2Q9ULQ0 834 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.39■□□□□ 0.69
SMPD1-208ENST00000533123 GOLGA8SH3BPF8 625 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 SOAT2O75908 522 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 CNPP09543 421 aaKnown RBP19.39■□□□□ 0.69
SMPD1-208ENST00000533123 GPR15P49685 360 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 NDUFV1P49821 464 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 ZNF252P-AS1Q0IIN9 211 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 SMARCB1Q12824 385 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 CAMK1Q14012 370 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 RAB30Q15771 203 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 PLPP4Q5VZY2 271 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 ZNF461Q8TAF7 563 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 SPPL2BQ8TCT7 592 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 MICAL1Q8TDZ2 1067 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 DDX47Q9H0S4 455 aaKnown RBP19.39■□□□□ 0.69
SMPD1-208ENST00000533123 LRRC4Q9HBW1 653 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMPD1-208ENST00000533123 USTQ9Y2C2 406 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 SSX2IPQ9Y2D8 614 aa19.39■□□□□ 0.69
SMPD1-208ENST00000533123 TMEM191CA6NGB0 347 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 ZSCAN5CA6NGD5 496 aaPredicted RBP19.38■□□□□ 0.69
SMPD1-208ENST00000533123 HIDE1A8MVS5 230 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 HHLA1C9JL84 531 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 MYBL2P10244 700 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 RPL34P49207 117 aaKnown RBP19.38■□□□□ 0.69
SMPD1-208ENST00000533123 OGDHQ02218 1023 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 ADIGQ0VDE8 80 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 MGAT5BQ3V5L5 792 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 SDHAF4Q5VUM1 108 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 OR6B2Q6IFH4 312 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 VSTM1Q6UX27 236 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 FAM183BPQ6ZVS7 135 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 GPR65Q8IYL9 337 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 CLEC4CQ8WTT0 213 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 PIWIL1Q96J94 861 aaKnown RBP19.38■□□□□ 0.69
SMPD1-208ENST00000533123 SAMD11Q96NU1 681 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 SEPT5Q99719 369 aaPredicted RBP19.38■□□□□ 0.69
SMPD1-208ENST00000533123 SLC28A3Q9HAS3 691 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 RXFP1Q9HBX9 757 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 FNIP2Q9P278 1114 aa19.38■□□□□ 0.69
SMPD1-208ENST00000533123 PAPSS1O43252 624 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 ABLIM3O94929 683 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 GLI1P08151 1106 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 UBE3AQ05086 875 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 RAB33AQ14088 237 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 LLGL1Q15334 1064 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 PPP1R15BQ5SWA1 713 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 C3orf20Q8ND61 904 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 STKLD1Q8NE28 680 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 ARNTL2Q8WYA1 636 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 KCTD13Q8WZ19 329 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 STIM2Q9P246 746 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 RAD51CO43502 376 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 IRS1P35568 1242 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 SLC1A1P43005 524 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 ACADSBP45954 432 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 TKTL1P51854 596 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 RWDD2BP57060 319 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 TAS2R40P59535 323 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 GPM6BQ13491 265 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 ZNF268Q14587 947 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 BEND6Q5SZJ8 279 aaPredicted RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 DCUN1D2Q6PH85 259 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 MRPL43Q8N983 215 aaKnown RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 GPR152Q8TDT2 470 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 C2orf15Q8WU43 125 aaKnown RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 HNRNPLLQ8WVV9 542 aaKnown RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 NDRG1Q92597 394 aaKnown RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 UBXN6Q9BZV1 441 aa19.37■□□□□ 0.69
SMPD1-208ENST00000533123 AFF4Q9UHB7 1163 aaKnown RBP19.37■□□□□ 0.69
SMPD1-208ENST00000533123 H3BNC9 293 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 TUBBP07437 444 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 ATF2P15336 505 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 MAGEA11P43364 429 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 SNX16P57768 344 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 MCRS1Q96EZ8 462 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 PRO3102Q9H379 93 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 CYLDQ9NQC7 956 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 WDR35Q9P2L0 1181 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 IRAK3Q9Y616 596 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 TCRBV7S2A1N4TA0A589 114 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 C2orf71A6NGG8 1288 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 SEC24AO95486 1093 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 HAPLN1P10915 354 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-208ENST00000533123 TCF4P15884 667 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 CREMQ03060 361 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 SMC1AQ14683 1233 aaKnown RBP19.36■□□□□ 0.69
SMPD1-208ENST00000533123 TAF5Q15542 800 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 GLE1Q53GS7 698 aaKnown RBP19.36■□□□□ 0.69
SMPD1-208ENST00000533123 RAB41Q5JT25 222 aa19.36■□□□□ 0.69
SMPD1-208ENST00000533123 FAM102AQ5T9C2 384 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-208ENST00000533123 SEL1L2Q5TEA6 688 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms