RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CLEC17AQ6ZS10 378 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 ANKRD52Q8NB46 1076 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 LMO3Q8TAP4 145 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 CD101Q93033 1021 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 UBXN6Q9BZV1 441 aa31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP31.94■■■□□ 2.7
SSSCA1-207ENST00000533115 RIF1Q5UIP0 2472 aaKnown RBP31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 E2F8A0AVK6 867 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 SCAMP3O14828 347 aaKnown RBP31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 EGFP01133 1207 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 NRLP54845 237 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 CYLDQ9NQC7 956 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 OSER1Q9NX31 292 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 TBC1D14Q9P2M4 693 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 USP3Q9Y6I4 520 aa31.93■■■□□ 2.7
SSSCA1-207ENST00000533115 PAPSS2O95340 614 aaPredicted RBP31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 AFPP02771 609 aaKnown RBP31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 SLC8A3P57103 927 aa31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 SGO2Q562F6 1265 aa31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 CCDC186Q7Z3E2 898 aa31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 NMUR1Q9HB89 426 aa31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 SH3BP1Q9Y3L3 701 aa31.92■■■□□ 2.7
SSSCA1-207ENST00000533115 A0A1W2PQH9 124 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 TBX18O95935 607 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 CYP17A1P05093 508 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 TTC30AQ86WT1 665 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 PPM1KQ8N3J5 372 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 MLKLQ8NB16 471 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 EHBP1Q8NDI1 1231 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 TSPAN16Q9UKR8 245 aa31.91■■■□□ 2.7
SSSCA1-207ENST00000533115 LILRB5O75023 590 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 VDRP11473 427 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 CD19P15391 556 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 ATP5C1P36542 298 aaKnown RBP31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 DHCR24Q15392 516 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 GOLGA7BQ2TAP0 167 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 PIGZQ86VD9 579 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 MED15Q96RN5 788 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 MTPAPQ9NVV4 582 aaKnown RBP eCLIP31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 C2orf42Q9NWW7 574 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 NAGPAQ9UK23 515 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 KIAA1257Q9ULG3 409 aa31.9■■■□□ 2.7
SSSCA1-207ENST00000533115 RARGP13631 454 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 PSEN1P49768 467 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 GAB4Q2WGN9 574 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 FBXO43Q4G163 708 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 RAB41Q5JT25 222 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 TMEM270Q6UE05 265 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 SCD5Q86SK9 330 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 KAT5Q92993 513 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 OTUB2Q96DC9 234 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 KLF16Q9BXK1 252 aaPredicted RBP31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 HESX1Q9UBX0 185 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 PCDHB4Q9Y5E5 795 aa31.89■■■□□ 2.7
SSSCA1-207ENST00000533115 FAM186AA6NE01 2351 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 K7ESF4 209 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 ATG13O75143 517 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 RNF40O75150 1001 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 IRF1P10914 325 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 OPRD1P41143 372 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 BCAT1P54687 386 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 PKN3Q6P5Z2 889 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 KLHDC10Q6PID8 442 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 RHBDF2Q6PJF5 856 aa31.88■■■□□ 2.69
SSSCA1-207ENST00000533115 PTPRZ1P23471 2315 aaPredicted RBP31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 ADH1CP00326 375 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 PAEPP09466 180 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 GCNT1Q02742 428 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 PDE4CQ08493 712 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 RRAGAQ7L523 313 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 TADA2BQ86TJ2 420 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 ARHGEF19Q8IW93 802 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 ZNF276Q8N554 614 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 SUMF1Q8NBK3 374 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 EZH1Q92800 747 aaPredicted RBP31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 WBP2Q969T9 261 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 CNOT6LQ96LI5 555 aaKnown RBP31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 NUP62CLQ9H1M0 184 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 LMBRD1Q9NUN5 540 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 CLIC5Q9NZA1 410 aa31.87■■■□□ 2.69
SSSCA1-207ENST00000533115 CHURC1-FNTBB4DL54 471 aa31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 XPO1O14980 1071 aaKnown RBP31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 BST2Q10589 180 aaKnown RBP31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 C10orf120Q5SQS8 335 aa31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 BBS7Q8IWZ6 715 aa31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 INTS2Q9H0H0 1204 aaKnown RBP31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 DNMT3LQ9UJW3 386 aa31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 NUDT5Q9UKK9 219 aa31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 WDR87Q6ZQQ6 2873 aa31.86■■■□□ 2.69
SSSCA1-207ENST00000533115 TULP2O00295 520 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 O00370 1275 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 RALAP11233 206 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 TKTL1P51854 596 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 GOLGA8FQ08AF8 430 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 GOLGA8DPQ0D2H9 430 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 HTR3DQ70Z44 454 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 CREBRFQ8IUR6 639 aa31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 CDK5RAP1Q96SZ6 601 aaKnown RBP31.85■■■□□ 2.69
SSSCA1-207ENST00000533115 RNF225M0QZC1 329 aaPredicted RBP31.84■■■□□ 2.69
SSSCA1-207ENST00000533115 MDM4O15151 490 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms