RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 OTUB2Q96DC9 234 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 ANKRD36BP1Q96IX9 119 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 ZFRQ96KR1 1074 aaKnown RBP13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 C8orf48Q96LL4 319 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 SLITRK1Q96PX8 696 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 ACCSQ96QU6 501 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 CBWD1Q9BRT8 395 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 TMEM30AQ9NV96 361 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 DEC1Q9P2X7 70 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 APOBEC2Q9Y235 224 aaKnown RBP13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 RAXQ9Y2V3 346 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 NME7Q9Y5B8 376 aa13.43□□□□□ -0.26
AP004550.1-201ENST00000532652 PTPRJQ12913 1337 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 NYNRINQ9P2P1 1898 aaKnown RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 ZNF462Q96JM2 2506 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 GCNT3O95395 438 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 ZIC2O95409 532 aaPredicted RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 LONP1P36776 959 aaKnown RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 CACNA2D1P54289 1103 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 ANO4Q32M45 955 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 EGFLAMQ63HQ2 1017 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 TOGARAM2Q6ZUX3 1019 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 NUDT18Q6ZVK8 323 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 HS2ST1Q7LGA3 356 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 SLCO6A1Q86UG4 719 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 BBS7Q8IWZ6 715 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 OR5B17Q8NGF7 314 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 IPO4Q8TEX9 1081 aaKnown RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 ZNF419Q96HQ0 510 aaPredicted RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 LRIG1Q96JA1 1093 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 ACOX2Q99424 681 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 PCIF1Q9H4Z3 704 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 FAM124BQ9H5Z6 455 aaPredicted RBP13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 CD248Q9HCU0 757 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 SEL1LQ9UBV2 794 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 SUSD2Q9UGT4 822 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 STARD13Q9Y3M8 1113 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 KIF3AQ9Y496 699 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 CFAP46Q8IYW2 2715 aa13.42□□□□□ -0.26
AP004550.1-201ENST00000532652 H3BQV1 296 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 ZBTB24O43167 697 aaPredicted RBP13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 COCHO43405 550 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 CBFA2T3O75081 653 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 NDUFS2O75306 463 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 MAOBP27338 520 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 CASP5P51878 434 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 GRIK2Q13002 908 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 TMEM25Q86YD3 366 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 SYCP3Q8IZU3 236 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 WBP2Q969T9 261 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 MMS19Q96T76 1030 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 MRPL45Q9BRJ2 306 aaKnown RBP13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 SLC6A17Q9H1V8 727 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 SPHK2Q9NRA0 654 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 ATMQ13315 3056 aa13.41□□□□□ -0.26
AP004550.1-201ENST00000532652 MYO18BQ8IUG5 2567 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 EIF4E1BA6NMX2 242 aaKnown RBP13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 CLDN5O00501 218 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 TNNC2P02585 160 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 GNSP15586 552 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 GAP43P17677 238 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 YWHAQP27348 245 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 GNL1P36915 607 aaPredicted RBP13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 WDR45BQ5MNZ6 344 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 HECTD3Q5T447 861 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 SYCP2LQ5T4T6 812 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 GRAMD4Q6IC98 578 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 SDE2Q6IQ49 451 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 GLRX5Q86SX6 157 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 CHPFQ8IZ52 775 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 NUP93Q8N1F7 819 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 PDZD8Q8NEN9 1154 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 SETD7Q8WTS6 366 aaKnown RBP13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 FOXJ1Q92949 421 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 FBXO32Q969P5 355 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 ZNF518BQ9C0D4 1074 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 ELOVL4Q9GZR5 314 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 SNX25Q9H3E2 840 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 CCSER2Q9H7U1 834 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 DNAJC17Q9NVM6 304 aaKnown RBP13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 CHORDC1Q9UHD1 332 aaPredicted RBP13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 PCOLCE2Q9UKZ9 415 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 PCDHB13Q9Y5F0 798 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 RAD54BQ9Y620 910 aa13.4□□□□□ -0.26
AP004550.1-201ENST00000532652 SPTA1P02549 2419 aa13.39□□□□□ -0.27
AP004550.1-201ENST00000532652 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
AP004550.1-201ENST00000532652 IRF1P10914 325 aa13.39□□□□□ -0.27
AP004550.1-201ENST00000532652 PTPN1P18031 435 aaKnown RBP13.39□□□□□ -0.27
AP004550.1-201ENST00000532652 DUOXA2Q1HG44 320 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms