RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TSPAN14Q8NG11 270 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC35G2Q8TBE7 412 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 DPF3Q92784 378 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ACAP3Q96P50 834 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TINF2Q9BSI4 451 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CADM1Q9BY67 442 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 OXCT2Q9BYC2 517 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 UPF3AQ9H1J1 476 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 RNF186Q9NXI6 227 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CHKBQ9Y259 395 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ANGPTL3Q9Y5C1 460 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NFS1Q9Y697 457 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TRIOBPQ9H2D6 2365 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 RNF103-CHMP3A0A140T963 221 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TTLL13PA6NNM8 815 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 M0QZ92 97 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC16A4O15374 487 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CA12O43570 354 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 USP1O94782 785 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 BCL10O95999 233 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 RAG1P15918 1043 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 HNRNPH3P31942 346 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MAGEA4P43358 317 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SERPINB10P48595 397 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 KRT6CP48668 564 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 COPAP53621 1224 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PMS1P54277 932 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 DRG2P55039 364 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ACTR2P61160 394 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 FUT2Q10981 343 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 BFSP1Q12934 665 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 HSDL1Q3SXM5 330 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SEZ6Q53EL9 994 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF618Q5T7W0 954 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TEDDM1Q5T9Z0 273 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 LIN9Q5TKA1 542 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MFSD5Q6N075 450 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TMEM214Q6NUQ4 689 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TTC33Q6PID6 262 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 KLHDC10Q6PID8 442 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 GLYCTKQ8IVS8 523 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 ZFYVE19Q96K21 471 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 NSMCE3Q96MG7 304 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MED15Q96RN5 788 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 CEP44Q9C0F1 390 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 WNT8AQ9H1J5 351 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 EBF3Q9H4W6 596 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 DDX56Q9NY93 547 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 MARCOQ9UEW3 520 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 SOX13Q9UN79 622 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 KCNH4Q9UQ05 1017 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 PCDHA10Q9Y5I2 948 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
TGFBR3-209ENST00000532540 EML1O00423 815 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 HNRNPDLO14979 420 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MAGEB3O15480 346 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 EDF1O60869 148 aaKnown RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MFN2O95140 757 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MSL3P1P0C860 447 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ATF7P17544 494 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CASP5P51878 434 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ITGA8P53708 1063 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ADAM17P78536 824 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CDK16Q00536 496 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MKRN4PQ13434 485 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 TUBA3CQ13748 450 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MAPK6Q16659 721 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 BBS9Q3SYG4 887 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM160B1Q5W0V3 765 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PPP1R2P3Q6NXS1 205 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 KLHL35Q6PF15 583 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 TRAF7Q6Q0C0 670 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 DEFB128Q7Z7B8 93 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ARID3BQ8IVW6 561 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF786Q8N393 782 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 FBXL16Q8N461 479 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF75CPQ92670 426 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ITPKCQ96DU7 683 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CMTM5Q96DZ9 223 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 RMND5BQ96G75 393 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CDHR1Q96JP9 859 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 FOXP3Q9BZS1 431 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 GINM1Q9NU53 330 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ARMCX1Q9P291 453 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 SEL1LQ9UBV2 794 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PRKAG2Q9UGJ0 569 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ARHGAP26Q9UNA1 814 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 MYRFQ9Y2G1 1151 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 LY75O60449 1722 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 CCDC162PA2VCL2 907 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 KRT37O76014 449 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 TRIM16O95361 564 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 ZBTB11O95625 1053 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 RSBN1Q5VWQ0 802 aaPredicted RBP7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 DUPD1Q68J44 220 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 PADI6Q6TGC4 694 aa7.03□□□□□ -1.28
TGFBR3-209ENST00000532540 RNF19BQ6ZMZ0 732 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms