RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 C9orf72Q96LT7 481 aa16.32■□□□□ 0.2
PPFIA1-222ENST00000532504 APOL2Q9BQE5 337 aa16.32■□□□□ 0.2
PPFIA1-222ENST00000532504 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
PPFIA1-222ENST00000532504 NT5MQ9NPB1 228 aa16.32■□□□□ 0.2
PPFIA1-222ENST00000532504 ZC3H7BQ9UGR2 993 aaKnown RBP16.32■□□□□ 0.2
PPFIA1-222ENST00000532504 PSMD3O43242 534 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 MAP3K7O43318 606 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 PSTPIP1O43586 416 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 ACADMP11310 421 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 XPO6Q96QU8 1125 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CAPS2Q9BXY5 557 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 RBM12Q9NTZ6 932 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 TBC1D3BA6NDS4 549 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 MTSS1O43312 755 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CSH1P0DML2 217 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CSH2P0DML3 217 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CSE1LP55060 971 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 MCL1Q07820 350 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 STARD3Q14849 445 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 PDK2Q15119 407 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 TKTL2Q9H0I9 626 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CHMP2BQ9UQN3 213 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 TRAV19A0A0A6YYK7 116 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 STX7O15400 261 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CASP8Q14790 479 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 C6orf118Q5T5N4 469 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 PTPRN2Q92932 1015 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 STMN2Q93045 179 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CEP41Q9BYV8 373 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 LATS2Q9NRM7 1088 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 PKP3Q9Y446 797 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CAPN6Q9Y6Q1 641 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 GGCXP38435 758 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 STX1BP61266 288 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 ADCY2Q08462 1091 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 CST9Q5W186 159 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 SLC13A5Q86YT5 568 aaPredicted RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 LENG9Q96B70 501 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 RBM15Q96T37 977 aaKnown RBP eCLIP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 MED4Q9NPJ6 270 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 UBP1Q9NZI7 540 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 TPX2Q9ULW0 747 aaKnown RBP16.31■□□□□ 0.2
PPFIA1-222ENST00000532504 ZNF263O14978 683 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 RAMP2O60895 175 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 ZNF189O75820 626 aaPredicted RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 RPL17P18621 184 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 WDR59Q6PJI9 974 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 LRRC52Q8N7C0 313 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 COG1Q8WTW3 980 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 MRFAP1Q9Y605 127 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 A0A087WUV0 522 aaPredicted RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 GABRR2P28476 465 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 EIF3BP55884 814 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 TARBP2Q15633 366 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 CNGA2Q16280 664 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 FASTKD1Q53R41 847 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 ERMARDQ5T6L9 678 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 TRIM54Q9BYV2 358 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 MLXIPLQ9NP71 852 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 ADAM28Q9UKQ2 775 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 Q9Y3F1 56 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 CYP2F1P24903 491 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 OTUD4Q01804 1114 aaKnown RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 TFDP3Q5H9I0 405 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 SLC7A5P2Q9GIP4 190 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 NEU2Q9Y3R4 380 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 DDX3XO00571 662 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■■■ 27.6
PPFIA1-222ENST00000532504 CHEK2O96017 543 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 RARGP13631 454 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 TRIM42Q8IWZ5 723 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 C20orf96Q9NUD7 363 aaPredicted RBP16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 AIPL1Q9NZN9 384 aa16.3■□□□□ 0.2
PPFIA1-222ENST00000532504 CCL16O15467 120 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 PCDH8O95206 1070 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 HSPA4LO95757 839 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 CLCN6P51797 869 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 ZDHHC17Q8IUH5 632 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 NUP93Q8N1F7 819 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 TRAIPQ9BWF2 469 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 RCN2Q14257 317 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 FUT10Q6P4F1 479 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 FAM71BQ8TC56 605 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 CRLS1Q9UJA2 301 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 MTFR1Q15390 333 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 BMT2Q1RMZ1 405 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 C15orf59Q2T9L4 293 aaPredicted RBP16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 RETSATQ6NUM9 610 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 MFSD14AQ96MC6 490 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 E2F8A0AVK6 867 aa16.29■□□□□ 0.2
PPFIA1-222ENST00000532504 DHX15O43143 795 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms