RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 SMAD4Q13485 552 aaKnown RBP8.42□□□□□ -1.06
TRIM49-202ENST00000532501 CBX2Q14781 532 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-202ENST00000532501 TEAD2Q15562 447 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 CLEC16AQ2KHT3 1053 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 DENND5BQ6ZUT9 1274 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 GET4Q7L5D6 327 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-202ENST00000532501 CNGA4Q8IV77 575 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 NPAS3Q8IXF0 933 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 ATRIPQ8WXE1 791 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 HLA-CQ95604 372 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 SPATA17Q96L03 361 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 COL25A1Q9BXS0 654 aaPredicted RBP8.42□□□□□ -1.06
TRIM49-202ENST00000532501 PACSIN1Q9BY11 444 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 TRIM7Q9C029 511 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 MIS12Q9H081 205 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
TRIM49-202ENST00000532501 HESX1Q9UBX0 185 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 NUDT5Q9UKK9 219 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 KIAA1257Q9ULG3 409 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 CUL9Q8IWT3 2517 aa8.42□□□□□ -1.06
TRIM49-202ENST00000532501 PATJQ8NI35 1801 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 ATP8B3O60423 1300 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 DOCK8Q8NF50 2099 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 A0A1W2PQH9 124 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TCRBV5S1A1TA0A578 114 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 C2orf78A6NCI8 922 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TMCO5BA8MYB1 307 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 SCAMP3O14828 347 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TRIM66O15016 1216 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 PRAMEF12O95522 483 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TBX18O95935 607 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 ZDHHC11BP0C7U3 371 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 CSH1P0DML2 217 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 CSH2P0DML3 217 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 HOXB8P17481 243 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TFE3P19532 575 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 GGCXP38435 758 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TKTL1P51854 596 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 EPHB3P54753 998 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 DAOAP59103 153 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 RPL10AP62906 217 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TSR1Q2NL82 804 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 LEXMQ3ZCV2 418 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 PABPC1LQ4VXU2 614 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 RAB6CQ53S08 254 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TDRD12Q587J7 1177 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 OTUD1Q5VV17 481 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TXNDC8Q6A555 127 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 RAD9BQ6WBX8 426 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 MMS22LQ6ZRQ5 1243 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 FAM183BPQ6ZVS7 135 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 MON1BQ7L1V2 547 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 CPNE8Q86YQ8 564 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 NUP93Q8N1F7 819 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 OR8K1Q8NGG5 319 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 SYN2Q92777 582 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 FBXO32Q969P5 355 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 MYRFLQ96LU7 910 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 NECAB3Q96P71 396 aaPredicted RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 LRRC3BQ96PB8 259 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 C11orf70Q9BRQ4 267 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 RAB6CQ9H0N0 254 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 LHX5Q9H2C1 402 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 CCSER2Q9H7U1 834 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 WDR6Q9NNW5 1121 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 SPTLC3Q9NUV7 552 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 MAFFQ9ULX9 164 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 TFR2Q9UP52 801 aa8.41□□□□□ -1.06
TRIM49-202ENST00000532501 REXO2Q9Y3B8 237 aaKnown RBP8.41□□□□□ -1.06
TRIM49-202ENST00000532501 ZNF840PA6NDX5 716 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 C2CD4DB7Z1M9 353 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 GRAP2O75791 330 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 SERPING1P05155 500 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 MMP8P22894 467 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 FCARP24071 287 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 ANXA13P27216 316 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 YWHAQP27348 245 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 GSDMDP57764 484 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 BPIFB4P59827 614 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 VEPH1Q14D04 833 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 STILQ15468 1287 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
TRIM49-202ENST00000532501 OLFML1Q6UWY5 402 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 CCDC186Q7Z3E2 898 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 TMEM110Q86TL2 294 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 XYLT1Q86Y38 959 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 ADAMTS19Q8TE59 1207 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 KCTD13Q8WZ19 329 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 ARHGEF26Q96DR7 871 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 P2RY11Q96G91 374 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 TRMT2BQ96GJ1 504 aaKnown RBP8.4□□□□□ -1.06
TRIM49-202ENST00000532501 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 ZNF512Q96ME7 567 aaPredicted RBP8.4□□□□□ -1.06
TRIM49-202ENST00000532501 CYP2S1Q96SQ9 504 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 RPP25Q9BUL9 199 aaKnown RBP8.4□□□□□ -1.06
TRIM49-202ENST00000532501 SLC46A2Q9BY10 475 aa8.4□□□□□ -1.06
TRIM49-202ENST00000532501 RNF38Q9H0F5 515 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms