RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 PIAS1O75925 651 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 TTC4O95801 387 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 MYCP01106 439 aaPredicted RBP15.87■□□□□ 0.13
SRPRA-206ENST00000532259 ITGAVP06756 1048 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 LSP1P33241 339 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 MDH1P40925 334 aaKnown RBP15.87■□□□□ 0.13
SRPRA-206ENST00000532259 ACLYP53396 1101 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 NKX3-2P78367 333 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 TIGD5Q53EQ6 642 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 AGBL2Q5U5Z8 902 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 ANKRD22Q5VYY1 191 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 SMYD5Q6GMV2 418 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 DRICH1Q6PGQ1 229 aaPredicted RBP15.87■□□□□ 0.13
SRPRA-206ENST00000532259 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
SRPRA-206ENST00000532259 TPX2Q9ULW0 747 aaKnown RBP15.87■□□□□ 0.13
SRPRA-206ENST00000532259 ANKRD65E5RJM6 399 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 GABRDO14764 452 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 ITGB1P05556 798 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 SETSIPP0DME0 302 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 BRCC3P46736 316 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 CTCFP49711 727 aaPredicted RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 SF3A3Q12874 501 aaKnown RBP eCLIP15.86■□□□□ 0.137e-7■□□□□ 9.8
SRPRA-206ENST00000532259 ACAP1Q15027 740 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 SPDYCQ5MJ68 293 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 DARS2Q6PI48 645 aaKnown RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 TRMT10CQ7L0Y3 403 aaKnown RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 FAM131BQ86XD5 332 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 ANKMY2Q8IV38 441 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 PYROXD2Q8N2H3 581 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 STK32AQ8WU08 396 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 DHX35Q9H5Z1 703 aaKnown RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 RSAD1Q9HA92 442 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 CHST12Q9NRB3 414 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 DDX20Q9UHI6 824 aaKnown RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 TCRBV7S3A2A0A539 114 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 H7C0C1 242 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 APOC4-APOC2K7ER74 178 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 MCF2LO15068 1137 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 ENDOD1O94919 500 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 APOC2P02655 101 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 ATP5OP48047 213 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 CCT5P48643 541 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 TRIM71Q2Q1W2 868 aaKnown RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 CLEC20AQ6ZU45 233 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 HFE2Q6ZVN8 426 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 GPRIN1Q7Z2K8 1008 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 CCDC185Q8N715 623 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 P3H4Q92791 437 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 TBCBQ99426 244 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 CREBZFQ9NS37 354 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 KRT82Q9NSB4 513 aa15.86■□□□□ 0.13
SRPRA-206ENST00000532259 DRG1Q9Y295 367 aaKnown RBP15.86■□□□□ 0.13
SRPRA-206ENST00000532259 B3GAT3O94766 335 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 CREB1P16220 341 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 RPL22P35268 128 aaKnown RBP15.85■□□□□ 0.13
SRPRA-206ENST00000532259 MAGEA4P43358 317 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 BASP1P80723 227 aaKnown RBP15.85■□□□□ 0.13
SRPRA-206ENST00000532259 CAV1Q03135 178 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 AUHQ13825 339 aaKnown RBP15.85■□□□□ 0.13
SRPRA-206ENST00000532259 MBTPS1Q14703 1052 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 UPP1Q16831 310 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 DCAF6Q58WW2 860 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 MAP3K21Q5TCX8 1036 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 DEFB106AQ8N104 65 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 ADAM32Q8TC27 787 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 HNRNPABQ99729 332 aaKnown RBP15.85■□□□□ 0.13
SRPRA-206ENST00000532259 DUSP16Q9BY84 665 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 PCDH18Q9HCL0 1135 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 B4GALT3O60512 393 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 SLC26A9Q7LBE3 791 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 CCDC13Q8IYE1 715 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 ZBED8Q8IZ13 594 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 ZCCHC9Q8N567 271 aaKnown RBP15.85■□□□□ 0.13
SRPRA-206ENST00000532259 PQLC3Q8N755 202 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 BBOF1Q8ND07 529 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 PCDH19Q8TAB3 1148 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 RAET1EQ8TD07 263 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 TLCD1Q96CP7 247 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 PCED1BQ96HM7 432 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 RNF157Q96PX1 679 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 C11orf84Q9BUA3 381 aaPredicted RBP15.85■□□□□ 0.13
SRPRA-206ENST00000532259 PCDH9Q9HC56 1237 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 SLC12A6Q9UHW9 1150 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 MFHAS1Q9Y4C4 1052 aa15.85■□□□□ 0.13
SRPRA-206ENST00000532259 A0A0U1RQF3 1178 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 E7EVH7 732 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 DPYSL4O14531 572 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 RPL34P49207 117 aaKnown RBP15.84■□□□□ 0.13
SRPRA-206ENST00000532259 NME3Q13232 169 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 DSC3Q14574 896 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 ANKRD20A8PQ5CZ79 823 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 RNASEH2BQ5TBB1 312 aaKnown RBP15.84■□□□□ 0.13
SRPRA-206ENST00000532259 FAXCQ5TGI0 409 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 MRPL10Q7Z7H8 261 aaKnown RBP15.84■□□□□ 0.13
SRPRA-206ENST00000532259 RPAINQ86UA6 219 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 RTN4RL1Q86UN2 441 aaPredicted RBP15.84■□□□□ 0.13
SRPRA-206ENST00000532259 TTC13Q8NBP0 860 aa15.84■□□□□ 0.13
SRPRA-206ENST00000532259 SLC38A7Q9NVC3 462 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms