RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CCDC149Q6ZUS6 474 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRAPPC11Q7Z392 1133 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 THEM5Q8N1Q8 247 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 MEIOBQ8N635 442 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 C1orf131Q8NDD1 294 aaKnown RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 CMASQ8NFW8 434 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 CXorf38Q8TB03 319 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 SLC7A14Q8TBB6 771 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 SNRNP27Q8WVK2 155 aaKnown RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 SMG7Q92540 1137 aaKnown RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 BORCS6Q96GS4 357 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 HPDLQ96IR7 371 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 FAM84AQ96KN4 292 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 INSM2Q96T92 566 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 TCF12Q99081 682 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 TSG101Q99816 390 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 SELENOOQ9BVL4 669 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 RHOBTB2Q9BYZ6 727 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 POMKQ9H5K3 350 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 CYP4F11Q9HBI6 524 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 GPN3Q9UHW5 284 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 SIX4Q9UIU6 781 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 CDH22Q9UJ99 828 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 MAN1B1Q9UKM7 699 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRHDEQ9UKU6 1024 aa6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 PNMA8BQ9ULN7 279 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 TDRD15B5MCY1 1934 aaKnown RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 SPTBN5Q9NRC6 3674 aaKnown RBP6.18□□□□□ -1.42
HMGB1P42-201ENST00000532126 ATG2AQ2TAZ0 1938 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRBV23-1A0A0A0MS06 115 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 LRRIQ3A6PVS8 624 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 LOC730098B7Z3J9 87 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 BIN1O00499 593 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 IKBKBO14920 756 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 CETN3O15182 167 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 MAPK13O15264 365 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 CCL16O15467 120 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 AKAP3O75969 853 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 CST3P01034 146 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 OR4Q2P0C623 313 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 KRT13P13646 458 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ATF2P15336 505 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 SP100P23497 879 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 HOXA9P31269 272 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 L1CAMP32004 1257 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 PSMC2P35998 433 aaKnown RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 FLT3P36888 993 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 VAMP7P51809 220 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 TNNC1P63316 161 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 DLG4P78352 724 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 FKBP3Q00688 224 aaKnown RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 LRRC63Q05C16 580 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ADCY1Q08828 1119 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 GPR17Q13304 367 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 BIRC3Q13489 604 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 SLC9A5Q14940 896 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 KRT72Q14CN4 511 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 CAMK4Q16566 473 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZCWPW2Q504Y3 356 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ARSJQ5FYB0 599 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ANKRD40Q6AI12 368 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 SCARA3Q6AZY7 606 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 CENPPQ6IPU0 288 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 LRRC69Q6ZNQ3 347 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 INTS8Q75QN2 995 aaKnown RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 RTL10Q7L3V2 364 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 SCUBE1Q8IWY4 988 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 FAM186BQ8IYM0 893 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ADSSL1Q8N142 457 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 TMEM86AQ8N2M4 240 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 PDCL2Q8N4E4 241 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 TOP6BLQ8N6T0 577 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 TDRD5Q8NAT2 981 aaKnown RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 OR10T2Q8NGX3 314 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 FEZF2Q8TBJ5 459 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 PLEKHO2Q8TD55 490 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 USP7Q93009 1102 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 ZNF707Q96C28 371 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 EEF2KMTQ96G04 330 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 DHTKD1Q96HY7 919 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 PGLYRP2Q96PD5 576 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 WDR6Q9NNW5 1121 aaKnown RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 CD320Q9NPF0 282 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 GDAP2Q9NXN4 497 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 LUZP4Q9P127 313 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 AFF4Q9UHB7 1163 aaKnown RBP6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 MAFFQ9ULX9 164 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 NR2E1Q9Y466 385 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 SNX9Q9Y5X1 595 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 MYO7AQ13402 2215 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 XIRP2A4UGR9 3374 aa6.17□□□□□ -1.42
HMGB1P42-201ENST00000532126 UPK3BL1B0FP48 263 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 UPK3BL2E5RIL1 263 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 J3QL48 77 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SPINT1O43278 529 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 STX10O60499 249 aa6.16□□□□□ -1.42
HMGB1P42-201ENST00000532126 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms