RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 ORC1Q13415 861 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 HSF5Q4G112 596 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-212ENST00000531589 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-212ENST00000531589 RHBDF2Q6PJF5 856 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 TADA2BQ86TJ2 420 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 C11orf74Q86VG3 221 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 FMR1NBQ8N0W7 255 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-212ENST00000531589 ZMIZ2Q8NF64 920 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 TSTD1Q8NFU3 115 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 NETO1Q8TDF5 533 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 USP33Q8TEY7 942 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 EZH1Q92800 747 aaPredicted RBP13.88□□□□□ -0.19
SF3B2-212ENST00000531589 ZC3H10Q96K80 434 aaKnown RBP13.88□□□□□ -0.19
SF3B2-212ENST00000531589 HHIPQ96QV1 700 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 PARD6AQ9NPB6 346 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■■ 51
SF3B2-212ENST00000531589 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 HMGXB4Q9UGU5 601 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 SCML2Q9UQR0 700 aa13.88□□□□□ -0.19
SF3B2-212ENST00000531589 K7EQS6 105 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 CILPO75339 1184 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 GRIA2P42262 883 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 ATXN1P54253 815 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 SLC8A3P57103 927 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 FKBP3Q00688 224 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 PNOCQ13519 176 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 ELF2Q15723 593 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 USP39Q53GS9 565 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 C2orf27AQ580R0 203 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 PRR23CQ6ZRP0 262 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 SMARCE1Q969G3 411 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 APOBEC3GQ9HC16 384 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 ARHGEF4Q9NR80 690 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 LSM7Q9UK45 103 aaKnown RBP13.87□□□□□ -0.19
SF3B2-212ENST00000531589 MMP17Q9ULZ9 603 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 PCDHGA5Q9Y5G8 931 aa13.87□□□□□ -0.19
SF3B2-212ENST00000531589 A0A0A0MRY4 1105 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 ALDH1A2O94788 518 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 RHOBTB1O94844 696 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 KAT7O95251 611 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 ACO1P21399 889 aaKnown RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 PPP1R2P41236 205 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 PRCPP42785 496 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 TNFRSF4P43489 277 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 DGKEP52429 567 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 SEC13P55735 322 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 LRRC63Q05C16 580 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 STIM1Q13586 685 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 GAB4Q2WGN9 574 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 LY6G5CQ5SRR4 150 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 TCERG1LQ5VWI1 586 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 KLHDC10Q6PID8 442 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 HTR3DQ70Z44 454 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 KBTBD6Q86V97 674 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 C12orf50Q8NA57 414 aaPredicted RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 KCNV2Q8TDN2 545 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 HEXIM2Q96MH2 286 aaKnown RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 TWNKQ96RR1 684 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 ARRDC1-AS1Q9H2J1 176 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 SPHK2Q9NRA0 654 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 DEC1Q9P2X7 70 aa13.86□□□□□ -0.19
SF3B2-212ENST00000531589 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 HELZP42694 1942 aaKnown RBP13.86□□□□□ -0.19
SF3B2-212ENST00000531589 FRYLO94915 3013 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 CACNA1AO00555 2505 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.85□□□□□ -0.19
SF3B2-212ENST00000531589 EPN2O95208 641 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 RALAP11233 206 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 HOXC13P31276 330 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 SLC6A11P48066 632 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 KIF11P52732 1056 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 CRY1Q16526 586 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 ANO4Q32M45 955 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 EOGTQ5NDL2 527 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 TRMT11Q7Z4G4 463 aaKnown RBP13.85□□□□□ -0.19
SF3B2-212ENST00000531589 BBS7Q8IWZ6 715 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 ZNF276Q8N554 614 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 ENGASEQ8NFI3 743 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 WHAMMQ8TF30 809 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 TMEM176AQ96HP8 235 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 CNOT6LQ96LI5 555 aaKnown RBP13.85□□□□□ -0.19
SF3B2-212ENST00000531589 POLMQ9NP87 494 aaPredicted RBP13.85□□□□□ -0.19
SF3B2-212ENST00000531589 CISHQ9NSE2 258 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 DNMT3LQ9UJW3 386 aa13.85□□□□□ -0.19
SF3B2-212ENST00000531589 CEP250Q9BV73 2442 aa13.84□□□□□ -0.19
SF3B2-212ENST00000531589 TBC1D3BA6NDS4 549 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms