RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 HPXP02790 462 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CHGBP05060 677 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 FYNP06241 537 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 RNASE1P07998 156 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 SNRPB2P08579 225 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 KRT7P08729 469 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PABPC4LP0CB38 370 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PRKAR1AP10644 381 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PDGFRAP16234 1089 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PAMP19021 973 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 GNA11P29992 359 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PCK1P35558 622 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 SOX6P35712 828 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 IFNAR2P48551 515 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 GSSP48637 474 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PCYT1AP49585 367 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PPM1FP49593 454 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 HNRNPFP52597 415 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 ACY1Q03154 408 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 KDSRQ06136 332 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CDC20Q12834 499 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MAP4K2Q12851 820 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 ALX1Q15699 326 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 DPY19L1Q2PZI1 675 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CNPY1Q3B7I2 92 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 TDRD12Q587J7 1177 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 HSP90AA5PQ58FG0 334 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 IGSF11Q5DX21 431 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 SPDYAQ5MJ70 313 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 RTP2Q5QGT7 225 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 VWA5B1Q5TIE3 1220 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 SHEQ5VZ18 495 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 GALNT18Q6P9A2 607 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 KDM7AQ6ZMT4 941 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 KIF6Q6ZMV9 814 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 Q6ZUG5 572 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 RFPL4BQ6ZWI9 263 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 USP50Q70EL3 339 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 HOMER1Q86YM7 354 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MMAAQ8IVH4 418 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 ABI1Q8IZP0 508 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CCDC63Q8NA47 563 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 ZBTB38Q8NAP3 1195 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 KCNH5Q8NCM2 988 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 ZSWIM2Q8NEG5 633 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 OR52K1Q8NGK4 314 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CDC26Q8NHZ8 85 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PIP4K2CQ8TBX8 421 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 ZNF473Q8WTR7 871 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 COG1Q8WTW3 980 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 COPS5Q92905 334 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 SGF29Q96ES7 293 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CNDP1Q96KN2 507 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CEP170P1Q96L14 293 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 HS6ST2Q96MM7 605 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 PTCHD1Q96NR3 888 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 OPALINQ96PE5 141 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MMP19Q99542 508 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 DNAJC7Q99615 494 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 C7orf25Q9BPX7 421 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 C9orf16Q9BUW7 83 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CCDC106Q9BWC9 280 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 RHOBTB2Q9BYZ6 727 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MMRN2Q9H8L6 949 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MOV10Q9HCE1 1003 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 IARS2Q9NSE4 1012 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MBNL3Q9NUK0 354 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 AP5S1Q9NUS5 200 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 HAUS2Q9NVX0 235 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MRPL39Q9NYK5 338 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 EHD3Q9NZN3 535 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 LUZP4Q9P127 313 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 HSFX1Q9UBD0 423 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CNOT6Q9ULM6 557 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 TBC1D30Q9Y2I9 924 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 GPR55Q9Y2T6 319 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MYH11P35749 1972 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 MYH7P12883 1935 aa5.03□□□□□ -1.6
ECHDC1-221ENST00000531582 CDK13Q14004 1512 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ACEP12821 1306 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 NPHP3Q7Z494 1330 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 TTC21BQ7Z4L5 1316 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 WDR33Q9C0J8 1336 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SNAPC4Q5SXM2 1469 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 MAGI1Q96QZ7 1491 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 DNAJC25-GNG10A0A024R161 153 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SH3PXD2BA1X283 911 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 FAM221BA6H8Z2 402 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 VWA5AO00534 786 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 NCK2O43639 380 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 NDUFA2O43678 99 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 GMNNO75496 209 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 RHOBTB3O94955 611 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 ASS1P00966 412 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 PRLP01236 227 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 IFNA14P01570 189 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SLC4A1P02730 911 aa5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 SNRPAP09012 282 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-221ENST00000531582 IFIT2P09913 472 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms