RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 CCDC170Q8IYT3 715 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 RTKN2Q8IZC4 609 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 NUP93Q8N1F7 819 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 SRBD1Q8N5C6 995 aaKnown RBP6.89□□□□□ -1.31
ATM-216ENST00000531525 UHMK1Q8TAS1 419 aaKnown RBP6.89□□□□□ -1.31
ATM-216ENST00000531525 TRAPPC9Q96Q05 1148 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 NOL10Q9BSC4 688 aaKnown RBP6.89□□□□□ -1.31
ATM-216ENST00000531525 FTOQ9C0B1 505 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATM-216ENST00000531525 ADAM7Q9H2U9 754 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 ZNF212Q9UDV6 495 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 SH3BP1Q9Y3L3 701 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 KNSTRNQ9Y448 316 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 HS3ST4Q9Y661 456 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 AKAP11Q9UKA4 1901 aa6.89□□□□□ -1.31
ATM-216ENST00000531525 CEMIPQ8WUJ3 1361 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 PRAMEF22A3QJZ6 481 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 NT5C1B-RDH14C9J2C7 533 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 PTGES3LE9PB15 166 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 KRIT1O00522 736 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 MLYCDO95822 493 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ATP5F1P24539 256 aaPredicted RBP6.88□□□□□ -1.31
ATM-216ENST00000531525 GABRB3P28472 473 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 NNMTP40261 264 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 HNF4AP41235 474 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 PHKA1P46020 1223 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 KCNJ5P48544 419 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 POLE2P56282 527 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 NLRP5P59047 1200 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ERVFC1P60507 584 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 DLG4P78352 724 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 SLC13A2Q13183 592 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 MAMLD1Q13495 774 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ACVR2BQ13705 512 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 TBCEQ15813 527 aaPredicted RBP6.88□□□□□ -1.31
ATM-216ENST00000531525 ZNF362Q5T0B9 420 aaPredicted RBP6.88□□□□□ -1.31
ATM-216ENST00000531525 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 IL27RAQ6UWB1 636 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 GADL1Q6ZQY3 521 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 PPP1R3BQ86XI6 285 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ARMC8Q8IUR7 673 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 RPAP2Q8IXW5 612 aaPredicted RBP6.88□□□□□ -1.31
ATM-216ENST00000531525 C17orf53Q8N3J3 647 aaPredicted RBP6.88□□□□□ -1.31
ATM-216ENST00000531525 TTC39CQ8N584 583 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 TMEM57Q8N5G2 664 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 LZTR1Q8N653 840 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ASB15Q8WXK1 588 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 FAM168AQ92567 244 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 MAML1Q92585 1016 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 CCDC120Q96HB5 630 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 NOX5Q96PH1 765 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ITPAQ9BY32 194 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 DEF6Q9H4E7 631 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 CHODLQ9H9P2 273 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 SRRDQ9UH36 339 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 CAMK2AQ9UQM7 478 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 RNF114Q9Y508 228 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 ZFP37Q9Y6Q3 630 aaPredicted RBP6.88□□□□□ -1.31
ATM-216ENST00000531525 ABCC12Q96J65 1359 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 LAMB2P55268 1798 aa6.88□□□□□ -1.31
ATM-216ENST00000531525 RIC1Q4ADV7 1423 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 GOLGA6L22H0YM25 854 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 BTN3A1O00481 513 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 KIAA0355O15063 1070 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 AHSGP02765 367 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 FUCA1P04066 466 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 CSF1P09603 554 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 CSH1P0DML2 217 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 CSH2P0DML3 217 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 ATP5DP30049 168 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 FLT3LGP49771 235 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 CCT4P50991 539 aaKnown RBP6.87□□□□□ -1.31
ATM-216ENST00000531525 HK2P52789 917 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 MGAT2Q10469 447 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 TEFQ10587 303 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 SNAPC2Q13487 334 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 GPR68Q15743 365 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 SLFN12LQ6IEE8 588 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 UNC5DQ6UXZ4 953 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 GAREM2Q75VX8 874 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 TRIML1Q8N9V2 468 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 OR6Y1Q8NGX8 325 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 TBC1D22AQ8WUA7 517 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 RSAD2Q8WXG1 361 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 N4BP2L2Q92802 583 aaPredicted RBP6.87□□□□□ -1.31
ATM-216ENST00000531525 TRIM43Q96BQ3 446 aaPredicted RBP6.87□□□□□ -1.31
ATM-216ENST00000531525 FOXRED1Q96CU9 486 aaPredicted RBP6.87□□□□□ -1.31
ATM-216ENST00000531525 NEIL1Q96FI4 390 aaPredicted RBP6.87□□□□□ -1.31
ATM-216ENST00000531525 TMX3Q96JJ7 454 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 SNX27Q96L92 541 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 PPP1R9BQ96SB3 815 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 TRIM54Q9BYV2 358 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 FOXP3Q9BZS1 431 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 PRDM13Q9H4Q3 707 aa6.87□□□□□ -1.31
ATM-216ENST00000531525 RBM12Q9NTZ6 932 aaKnown RBP6.87□□□□□ -1.31
ATM-216ENST00000531525 SCOCQ9UIL1 159 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms