RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 EEF1GP26641 437 aaKnown RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 TUBP50607 506 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 KPNA1P52294 538 aaPredicted RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 KRT31Q15323 416 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 ITPRIPL2Q3MIP1 535 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 NAIF1Q69YI7 327 aaPredicted RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 PM20D1Q6GTS8 502 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 PMF1Q6P1K2 205 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 CLDN23Q96B33 292 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 OSBPL6Q9BZF3 934 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 KCNH6Q9H252 994 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 VPS16Q9H269 839 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 C8orf33Q9H7E9 229 aaPredicted RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 FBRSL1Q9HCM7 1045 aaKnown RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 CYLDQ9NQC7 956 aa17.1■□□□□ 0.33
RELA-216ENST00000531238 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
RELA-216ENST00000531238 DUS2Q9NX74 493 aaKnown RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 NDRG2Q9UN36 371 aaKnown RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.1■□□□□ 0.33
RELA-216ENST00000531238 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
RELA-216ENST00000531238 FOXN3O00409 490 aaPredicted RBP17.09■□□□□ 0.33
RELA-216ENST00000531238 MDM4O15151 490 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 GREM1O60565 184 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 TLR5O60602 858 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 PNMA6AP0CW24 399 aaPredicted RBP17.09■□□□□ 0.33
RELA-216ENST00000531238 KRT5P13647 590 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 RFX1P22670 979 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 CTHP32929 405 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 PDE6CP51160 858 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 TKTL1P51854 596 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 BCAT1P54687 386 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 MFAP3P55082 362 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 BST2Q10589 180 aaKnown RBP17.09■□□□□ 0.33
RELA-216ENST00000531238 ADGRG2Q8IZP9 1017 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
RELA-216ENST00000531238 NELL2Q99435 816 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 FUCA2Q9BTY2 467 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 KLF16Q9BXK1 252 aaPredicted RBP17.09■□□□□ 0.33
RELA-216ENST00000531238 ULBP1Q9BZM6 244 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 ECT2Q9H8V3 914 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 DNAJC12Q9UKB3 198 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 PATJQ8NI35 1801 aa17.09■□□□□ 0.33
RELA-216ENST00000531238 KIF26AQ9ULI4 1882 aaPredicted RBP17.09■□□□□ 0.33
RELA-216ENST00000531238 USP34Q70CQ2 3546 aa17.08■□□□□ 0.33
RELA-216ENST00000531238 H0Y858 1186 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 PIK3R2O00459 728 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 CHRNB1P11230 501 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 ZNF18P17022 549 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 GPD2P43304 727 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 RGS7P49802 495 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 KLK7P49862 253 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 NUBP1P53384 320 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 PDGFRLQ15198 375 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 GAB4Q2WGN9 574 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
RELA-216ENST00000531238 DENND1BQ6P3S1 775 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 ENOSF1Q7L5Y1 443 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.32
RELA-216ENST00000531238 RALGPS2Q86X27 583 aaPredicted RBP17.08■□□□□ 0.32
RELA-216ENST00000531238 MAML2Q8IZL2 1156 aaPredicted RBP17.08■□□□□ 0.32
RELA-216ENST00000531238 ZNF606Q8WXB4 792 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 SHC3Q92529 594 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 NAA15Q9BXJ9 866 aaKnown RBP17.08■□□□□ 0.32
RELA-216ENST00000531238 LMAN1LQ9HAT1 526 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 CYTH4Q9UIA0 394 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 NAGPAQ9UK23 515 aa17.08■□□□□ 0.32
RELA-216ENST00000531238 LRRC10BA6NIK2 292 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
RELA-216ENST00000531238 ZBED1O96006 694 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 SETSIPP0DME0 302 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 LCP1P13796 627 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 GJA4P35212 333 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 CLCN1P35523 988 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 ATP5C1P36542 298 aaKnown RBP17.07■□□□□ 0.32
RELA-216ENST00000531238 MYL5Q02045 173 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 GAS6Q14393 721 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 PON2Q15165 354 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 KLHL40Q2TBA0 621 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 ZNF276Q8N554 614 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 WDTC1Q8N5D0 677 aa17.07■□□□□ 0.32
RELA-216ENST00000531238 RBM12Q9NTZ6 932 aaKnown RBP17.07■□□□□ 0.32
RELA-216ENST00000531238 LIMA1Q9UHB6 759 aaKnown RBP17.07■□□□□ 0.32
RELA-216ENST00000531238 YJEFN3A6XGL0 299 aa17.06■□□□□ 0.32
RELA-216ENST00000531238 E7ENQ6 273 aa17.06■□□□□ 0.32
RELA-216ENST00000531238 M0QYV0 167 aa17.06■□□□□ 0.32
RELA-216ENST00000531238 PES1O00541 588 aaKnown RBP17.06■□□□□ 0.32
RELA-216ENST00000531238 USP8P40818 1118 aa17.06■□□□□ 0.32
RELA-216ENST00000531238 IFNAR2P48551 515 aa17.06■□□□□ 0.32
RELA-216ENST00000531238 RPL34P49207 117 aaKnown RBP17.06■□□□□ 0.32
RELA-216ENST00000531238 GALK1P51570 392 aa17.06■□□□□ 0.32
RELA-216ENST00000531238 COPB1P53618 953 aaKnown RBP17.06■□□□□ 0.32
RELA-216ENST00000531238 SLC8A3P57103 927 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms