RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 GNAT1P11488 350 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ATF2P15336 505 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ARF4P18085 180 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 PCK1P35558 622 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 PNPLA4P41247 253 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 RPL21P46778 160 aaKnown RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 CD97P48960 835 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CPT1AP50416 773 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 IRAK1P51617 712 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 YARSP54577 528 aaKnown RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 PLTPP55058 493 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 INHBEP58166 350 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 KRT17Q04695 432 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 PTPN11Q06124 597 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 ACVR2BQ13705 512 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 UAP1Q16222 522 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 PTPROQ16827 1216 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 WDR72Q3MJ13 1102 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TFDP3Q5H9I0 405 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 COL13A1Q5TAT6 717 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 EEF1DP3Q658K8 133 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 OLFML2BQ68BL8 750 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 MFSD5Q6N075 450 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TTC27Q6P3X3 843 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 NOTUMQ6P988 496 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 SLC27A1Q6PCB7 646 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ZDHHC24Q6UX98 284 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 MICALCLQ6ZW33 695 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 MOB2Q70IA6 237 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TAOK1Q7L7X3 1001 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ARCQ7LC44 396 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 UNC93AQ86WB7 457 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ZDHHC17Q8IUH5 632 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CACTIN-AS1Q8N1I8 211 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 AGGF1Q8N302 714 aaeCLIP5.85□□□□□ -1.47
PCF11-205ENST00000530906 NME8Q8N427 588 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 RIBC1Q8N443 379 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 C1orf127Q8N9H9 656 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 GALNT11Q8NCW6 608 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 OR6J1Q8NGC5 347 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 FBXO25Q8TCJ0 367 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 STK32AQ8WU08 396 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 BRI3BPQ8WY22 251 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 RIN2Q8WYP3 895 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 USP6NLQ92738 828 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 NKD2Q969F2 451 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 ARL8AQ96BM9 186 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 MCRS1Q96EZ8 462 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TMEM176AQ96HP8 235 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 HPDLQ96IR7 371 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TTC25Q96NG3 672 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 SCLT1Q96NL6 688 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 UBL7Q96S82 380 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 CCDC77Q9BR77 488 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 TRIM51Q9BSJ1 452 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 CELF4Q9BZC1 486 aaKnown RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 ZMYND15Q9H091 742 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 DPH5Q9H2P9 285 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 RNPEPQ9H4A4 650 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 PRDM16Q9HAZ2 1276 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ACP6Q9NPH0 428 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 PDGFCQ9NRA1 345 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 PCMTD2Q9NV79 361 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ASIC3Q9UHC3 531 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 SIX4Q9UIU6 781 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 BARX2Q9UMQ3 279 aaPredicted RBP5.85□□□□□ -1.47
PCF11-205ENST00000530906 NR2E1Q9Y466 385 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 EVPLQ92817 2033 aa5.85□□□□□ -1.47
PCF11-205ENST00000530906 ARID1BQ8NFD5 2236 aaPredicted RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 A0A087WZ62 844 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 LACTBL1A8MY62 500 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 O00370 1275 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 TNFRSF10BO14763 440 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 B4GALT5O43286 388 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 PEX10O60683 326 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 RNF8O76064 485 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 ITGAVP06756 1048 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 NFICP08651 508 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 RALAP11233 206 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 KRT3P12035 628 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 CD19P15391 556 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 PAX3P23760 479 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 BRD2P25440 801 aaKnown RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 MDH1P40925 334 aaKnown RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 RAD23BP54727 409 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 PPP2R2AP63151 447 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 GNGT1P63211 74 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 MRPS25P82663 173 aaKnown RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 RASA2Q15283 850 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 GPR162Q16538 588 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 TAZQ16635 292 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SWI5Q1ZZU3 235 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 SLC10A6Q3KNW5 377 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 KRT71Q3SY84 523 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 DNAJC21Q5F1R6 531 aaKnown RBP5.84□□□□□ -1.47
PCF11-205ENST00000530906 JADE1Q6IE81 842 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 RHBDF2Q6PJF5 856 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 LCLAT1Q6UWP7 414 aa5.84□□□□□ -1.47
PCF11-205ENST00000530906 C4orf22Q6V702 233 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms