RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 GCLCP48506 637 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-213ENST00000530784 TEFQ10587 303 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 PTPRRQ15256 657 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 RBM20Q5T481 1227 aaKnown RBP8.49□□□□□ -1.05
CSDE1-213ENST00000530784 DAAM2Q86T65 1068 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 JDP2Q8WYK2 163 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 NT5C1BQ96P26 610 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 OSBPL9Q96SU4 736 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 HEPHQ9BQS7 1158 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 DUSP26Q9BV47 211 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 KIAA1586Q9HCI6 787 aa8.49□□□□□ -1.05
CSDE1-213ENST00000530784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.49□□□□□ -1.05
CSDE1-213ENST00000530784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.49□□□□□ -1.051e-10■■□□□ 11.5
CSDE1-213ENST00000530784 TNRC6CQ9HCJ0 1690 aaKnown RBP8.49□□□□□ -1.05
CSDE1-213ENST00000530784 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 VWC2LB2RUY7 222 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 ADM5C9JUS6 153 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 UNC5CO95185 931 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 MAPK10P53779 464 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 EIF5P55010 431 aaKnown RBP8.48□□□□□ -1.05
CSDE1-213ENST00000530784 NXPH1P58417 271 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 ITIH3Q06033 890 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 FAM102BQ5T8I3 360 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 CXorf57Q6NSI4 855 aaKnown RBP8.48□□□□□ -1.05
CSDE1-213ENST00000530784 ZNF790Q6PG37 636 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 PEG10Q86TG7 708 aaKnown RBP8.48□□□□□ -1.05
CSDE1-213ENST00000530784 ADGRG3Q86Y34 549 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 C2CD5Q86YS7 1000 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 MRGPRX1Q96LB2 322 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 TPSD1Q9BZJ3 242 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 R3HDMLQ9H3Y0 253 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 HESX1Q9UBX0 185 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 SCN7AQ01118 1682 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 WDR90Q96KV7 1748 aa8.48□□□□□ -1.05
CSDE1-213ENST00000530784 H0YIN7 160 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 CTNND1O60716 968 aaKnown RBP8.47□□□□□ -1.05
CSDE1-213ENST00000530784 RHOP08100 348 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 VPS53Q5VIR6 699 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 OVCH2Q7RTZ1 564 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 PRIMA1Q86XR5 153 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 DNAJC5GQ8N7S2 189 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 CFAP53Q96M91 514 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 SLC46A1Q96NT5 459 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 TEX13AQ9BXU3 409 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-213ENST00000530784 ACTRT3Q9BYD9 372 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 TTYH3Q9C0H2 523 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 CNNM1Q9NRU3 951 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 G3BP2Q9UN86 482 aaKnown RBP8.47□□□□□ -1.05
CSDE1-213ENST00000530784 DLEC1Q9Y238 1755 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 ADGRA2Q96PE1 1338 aa8.47□□□□□ -1.05
CSDE1-213ENST00000530784 WDR27A2RRH5 827 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 DCLK1O15075 740 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 TUSC2O75896 110 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 ELFN1P0C7U0 828 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 CD6P30203 668 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 IL6STP40189 918 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-213ENST00000530784 ZNF134P52741 427 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 CACNA2D1P54289 1103 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 TBC1D9BQ66K14 1250 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 FBXO42Q6P3S6 717 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 TMEM108Q6UXF1 575 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 FAM98AQ8NCA5 519 aaKnown RBP8.46□□□□□ -1.06
CSDE1-213ENST00000530784 IL17REQ8NFR9 667 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-213ENST00000530784 P2RX7Q99572 595 aaKnown RBP8.46□□□□□ -1.06
CSDE1-213ENST00000530784 KLC4Q9NSK0 619 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 PLEKHM1Q9Y4G2 1056 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-213ENST00000530784 TIAM2Q8IVF5 1701 aa8.46□□□□□ -1.06
CSDE1-213ENST00000530784 AFDNP55196 1824 aaKnown RBP8.45□□□□□ -1.06
CSDE1-213ENST00000530784 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
CSDE1-213ENST00000530784 GLTPD2A6NH11 291 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 NPHP1O15259 732 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 GRPP07492 148 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 PRKAR2BP31323 418 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 GRIA3P42263 894 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 PRELPP51888 382 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 LONRF3Q496Y0 759 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 PRR5LQ6MZQ0 368 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 FAM109AQ8N4B1 249 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 BRIP1Q9BX63 1249 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 ZMAT3Q9HA38 289 aaKnown RBP8.45□□□□□ -1.06
CSDE1-213ENST00000530784 IL17RBQ9NRM6 502 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 PIH1D1Q9NWS0 290 aaKnown RBP8.45□□□□□ -1.06
CSDE1-213ENST00000530784 MED16Q9Y2X0 877 aa8.45□□□□□ -1.06
CSDE1-213ENST00000530784 SIPA1L3O60292 1781 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-213ENST00000530784 CCDC151A5D8V7 595 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 U2AF1L5P0DN76 240 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 VEGFAP15692 232 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 AGFG1P52594 562 aaKnown RBP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 U2AF1Q01081 240 aaKnown RBP eCLIP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 NPNTQ6UXI9 565 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 RD3Q7Z3Z2 195 aa8.44□□□□□ -1.06
CSDE1-213ENST00000530784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 BOLLQ8N9W6 283 aaKnown RBP8.44□□□□□ -1.06
CSDE1-213ENST00000530784 CNBD1Q8NA66 436 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms