RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 SLITRK6Q9H5Y7 841 aa22.41■■□□□ 1.18
CAPN1-220ENST00000530567 TLR8Q9NR97 1041 aaKnown RBP22.41■■□□□ 1.18
CAPN1-220ENST00000530567 YJEFN3A6XGL0 299 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 SOBPA7XYQ1 873 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 E7ENQ6 273 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 FCARP24071 287 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 CLEC16AQ2KHT3 1053 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 WDR59Q6PJI9 974 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ZSCAN18Q8TBC5 510 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-220ENST00000530567 CPA5Q8WXQ8 436 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 NECAB3Q96P71 396 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-220ENST00000530567 NOX5Q96PH1 765 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 MIS12Q9H081 205 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 TRPC7Q9HCX4 862 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ABHD10Q9NUJ1 306 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 VCANP13611 3396 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ANHXE9PGG2 379 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 FBXO21O94952 628 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 PRAMEF12O95522 483 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ABL1P00519 1130 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 SERPING1P05155 500 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 PLEKP08567 350 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-220ENST00000530567 CDC25BP30305 580 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 TUBP50607 506 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ADKP55263 362 aaKnown RBP22.4■■□□□ 1.18
CAPN1-220ENST00000530567 HFE2Q6ZVN8 426 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 SCUBE3Q8IX30 993 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 CMTM8Q8IZV2 173 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ST13P5Q8NFI4 369 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-220ENST00000530567 OR8K1Q8NGG5 319 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 IRGQQ8WZA9 623 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 PIWIL1Q96J94 861 aaKnown RBP22.4■■□□□ 1.18
CAPN1-220ENST00000530567 RNF38Q9H0F5 515 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 CCSER2Q9H7U1 834 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 TRPV4Q9HBA0 871 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 ZMYM5Q9UJ78 669 aa22.4■■□□□ 1.18
CAPN1-220ENST00000530567 DDX3XO00571 662 aaKnown RBP eCLIP22.39■■□□□ 1.17
CAPN1-220ENST00000530567 TPM1P09493 284 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 PFKLP17858 780 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 WEE1P30291 646 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 YWHAGP61981 247 aaKnown RBP eCLIP22.39■■□□□ 1.17
CAPN1-220ENST00000530567 CENPCQ03188 943 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 HTR4Q13639 388 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 PARM1Q6UWI2 310 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 PLCD3Q8N3E9 789 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 ARL14EPQ8N8R7 260 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-220ENST00000530567 SLC30A5Q8TAD4 765 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 ADAMTS19Q8TE59 1207 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 SMARCD2Q92925 531 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 CYP2S1Q96SQ9 504 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 SMG9Q9H0W8 520 aaKnown RBP22.39■■□□□ 1.17
CAPN1-220ENST00000530567 GRPEL1Q9HAV7 217 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 CD320Q9NPF0 282 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.39■■□□□ 1.17
CAPN1-220ENST00000530567 CLIC5Q9NZA1 410 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 ARHGAP20Q9P2F6 1191 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 NAGPAQ9UK23 515 aa22.39■■□□□ 1.17
CAPN1-220ENST00000530567 AKR1B15C9JRZ8 316 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-220ENST00000530567 COCHO43405 550 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 TLR5O60602 858 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 MMP8P22894 467 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 GABRB2P47870 512 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 PSEN1P49768 467 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 PTP4A2Q12974 167 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 C2CD6Q53TS8 623 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 HECTD3Q5T447 861 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 OLFML1Q6UWY5 402 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 FAM183BPQ6ZVS7 135 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 CNGA4Q8IV77 575 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 ARID3BQ8IVW6 561 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-220ENST00000530567 TC2NQ8N9U0 490 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 FGF14Q92915 247 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 RSPRY1Q96DX4 576 aa22.38■■□□□ 1.17
CAPN1-220ENST00000530567 SEPT11Q9NVA2 429 aaKnown RBP22.38■■□□□ 1.17
CAPN1-220ENST00000530567 BZW2Q9Y6E2 419 aaKnown RBP22.38■■□□□ 1.17
CAPN1-220ENST00000530567 HELZP42694 1942 aaKnown RBP22.38■■□□□ 1.17
CAPN1-220ENST00000530567 TRAV19A0A0A6YYK7 116 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 GOLGA6L3A6NEY3 463 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 RARGP13631 454 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 TNFAIP3P21580 790 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 TDRD12Q587J7 1177 aaKnown RBP22.37■■□□□ 1.17
CAPN1-220ENST00000530567 BSPRYQ5W0U4 402 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 TANGO2Q6ICL3 276 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 ERICH1Q86X53 443 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 ARHGAP18Q8N392 663 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 ZNF276Q8N554 614 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 RIN3Q8TB24 985 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 IPO4Q8TEX9 1081 aaKnown RBP22.37■■□□□ 1.17
CAPN1-220ENST00000530567 USP13Q92995 863 aaPredicted RBP22.37■■□□□ 1.17
CAPN1-220ENST00000530567 RPP25Q9BUL9 199 aaKnown RBP22.37■■□□□ 1.17
CAPN1-220ENST00000530567 TAS2R14Q9NYV8 317 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 LIMD1Q9UGP4 676 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 CCL26Q9Y258 94 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 NUMBLQ9Y6R0 609 aa22.37■■□□□ 1.17
CAPN1-220ENST00000530567 TBX18O95935 607 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 CKMP06732 381 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 HDCP19113 662 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 VIPR2P41587 438 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 SLC7A9P82251 487 aa22.36■■□□□ 1.17
CAPN1-220ENST00000530567 ZXDBP98169 803 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms