RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 MIB1Q86YT6 1006 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 C3orf20Q8ND61 904 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 LGMNQ99538 433 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 TRIM56Q9BRZ2 755 aaKnown RBP12.82□□□□□ -0.36
SCN3B-206ENST00000530277 WWP1Q9H0M0 922 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 DLGAP2Q9P1A6 1054 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 SDK1Q7Z5N4 2213 aa12.82□□□□□ -0.36
SCN3B-206ENST00000530277 CLDN5O00501 218 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 CCDC22O60826 627 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 IL18RAPO95256 599 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ASS1P00966 412 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ADORA2AP29274 412 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 GRIK1P39086 918 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 GDF10P55107 478 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 PDCD2Q16342 344 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 KIF19Q2TAC6 998 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 KATNAL2Q8IYT4 538 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 NUF2Q9BZD4 464 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 SPATA31C2B4DYI2 1134 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 TNPO2O14787 897 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 SHOX2O60902 331 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 LGR5O75473 907 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 AP1G2O75843 785 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 NUDT17P0C025 328 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 MX2P20592 715 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 MMP13P45452 471 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 NME5P56597 212 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 DPYSL3Q14195 570 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 C18orf25Q96B23 403 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 KDM4CQ9H3R0 1056 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ENDOD1O94919 500 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 POMCP01189 267 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 C4BPAP04003 597 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 MMP8P22894 467 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 STIP1P31948 543 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 WNT7BP56706 349 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 PLIN5Q00G26 463 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 FAM183BPQ6ZVS7 135 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ZCCHC9Q8N567 271 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 CDC26Q8NHZ8 85 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 CKAP2Q8WWK9 683 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ALKBH8Q96BT7 664 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 SRPK1Q96SB4 655 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ACO2Q99798 780 aaKnown RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 NDE1Q9NXR1 346 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 SLC12A6Q9UHW9 1150 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
SCN3B-206ENST00000530277 DNAJC16Q9Y2G8 782 aa12.81□□□□□ -0.36
SCN3B-206ENST00000530277 MAGEB2O15479 319 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 PDE5AO76074 875 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 LUC7L3O95232 432 aaKnown RBP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 MGAT1P26572 445 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 SERPINB5P36952 375 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ITIH4Q14624 930 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ANO4Q32M45 955 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 BZW1Q7L1Q6 419 aaKnown RBP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 GALNT4Q8N4A0 578 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 V9GYQ6 96 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 hCG_2014768A0A024R1R8 64 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 FARP2O94887 1054 aaPredicted RBP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 FSBPO95073 299 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ZWINTO95229 277 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ERVK-10P10266 1014 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 SERPINB4P48594 390 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 MCL1Q07820 350 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ITGA9Q13797 1035 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 RASA2Q15283 850 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 BTBD8Q5XKL5 378 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 DEFB106AQ8N104 65 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ZDHHC18Q9NUE0 388 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ARHGAP28Q9P2N2 729 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 hCG_1818297A0A087WSY0 165 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 TMEM191CA6NGB0 347 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 GPR25O00155 361 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 TPST1O60507 370 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ATP5HO75947 161 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 ERBB2P04626 1255 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 TGM2P21980 687 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 TRIP10Q15642 601 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 HSP90AA5PQ58FG0 334 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 KIAA1841Q6NSI8 718 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 AFAP1L2Q8N4X5 818 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
SCN3B-206ENST00000530277 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms