RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FNIP1Q8TF40 1166 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 ANKRD7Q92527 254 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PIWIL1Q96J94 861 aaKnown RBP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 HSFY1Q96LI6 401 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 PGLYRP2Q96PD5 576 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 RHOXF2Q9BQY4 288 aa15.11■□□□□ 0.01
TTC39A-216ENST00000530004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.11■□□□□ 0.01
TTC39A-216ENST00000530004 F8VP50 259 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 PAPSS1O43252 624 aaPredicted RBP15.1■□□□□ 0.01
TTC39A-216ENST00000530004 PSTPIP1O43586 416 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 FAM200BP0CF97 657 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 ATF2P15336 505 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 KLRC2P26717 231 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 LONRF2Q1L5Z9 754 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 SEL1L2Q5TEA6 688 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 TPGS2Q68CL5 300 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 GPR153Q6NV75 609 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 CC2D1AQ6P1N0 951 aaPredicted RBP15.1■□□□□ 0.01
TTC39A-216ENST00000530004 OLFML1Q6UWY5 402 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 C4orf50Q6ZRC1 276 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 ADGRD2Q7Z7M1 963 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 PIGZQ86VD9 579 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 SPATA2LQ8IUW3 424 aaPredicted RBP15.1■□□□□ 0.01
TTC39A-216ENST00000530004 MMGT1Q8N4V1 131 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 ATAD1Q8NBU5 361 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 FAM161BQ96MY7 647 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 ANKZF1Q9H8Y5 726 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 CYLDQ9NQC7 956 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 KRT82Q9NSB4 513 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 LMCD1Q9NZU5 365 aa15.1■□□□□ 0.01
TTC39A-216ENST00000530004 AFF4Q9UHB7 1163 aaKnown RBP15.1■□□□□ 0.01
TTC39A-216ENST00000530004 TGM5O43548 720 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 BEST1O76090 585 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 VNN2O95498 520 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 LCP1P13796 627 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 ACADSBP45954 432 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 RPL34P49207 117 aaKnown RBP15.09■□□□□ 0.01
TTC39A-216ENST00000530004 SLC6A3Q01959 620 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 LILRA6Q6PI73 481 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 CLEC20AQ6ZU45 233 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 FAM35AQ86V20 835 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 ZDHHC17Q8IUH5 632 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 SPPL2BQ8TCT7 592 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 C2orf15Q8WU43 125 aaKnown RBP15.09■□□□□ 0.01
TTC39A-216ENST00000530004 FUBP3Q96I24 572 aaKnown RBP eCLIP15.09■□□□□ 0.01
TTC39A-216ENST00000530004 NAP1L3Q99457 506 aaPredicted RBP15.09■□□□□ 0.01
TTC39A-216ENST00000530004 AP1M1Q9BXS5 423 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 ABI2Q9NYB9 513 aaPredicted RBP15.09■□□□□ 0.01
TTC39A-216ENST00000530004 TMEM59LQ9UK28 342 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 PCDHB5Q9Y5E4 795 aa15.09■□□□□ 0.01
TTC39A-216ENST00000530004 COL4A4P53420 1690 aaPredicted RBP15.09■□□□□ 0.01
TTC39A-216ENST00000530004 KRIT1O00522 736 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 PER2O15055 1255 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 CLASP2O75122 1294 aaKnown RBP15.08■□□□□ 0.01
TTC39A-216ENST00000530004 GRAP2O75791 330 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 AP1G2O75843 785 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 TCF4P15884 667 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 GJC1P36383 396 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 CLCN4P51793 760 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 MAP3K7CLP57077 242 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 ADCY1Q08828 1119 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 RBM23Q86U06 439 aaKnown RBP15.08■□□□□ 0.01
TTC39A-216ENST00000530004 RHOBTB2Q9BYZ6 727 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 CRISPLD1Q9H336 500 aa15.08■□□□□ 0.01
TTC39A-216ENST00000530004 C2CD4BA6NLJ0 364 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 GLUD1P00367 558 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 C1RP00736 705 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 POU3F3P20264 500 aaPredicted RBP15.08■□□□□ 0
TTC39A-216ENST00000530004 GPD1P21695 349 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 BDNFP23560 247 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 DUSP4Q13115 394 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 ADGRE1Q14246 886 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 TAF5Q15542 800 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 CLUL1Q15846 466 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 CCDC70Q6NSX1 233 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 CLEC4CQ8WTT0 213 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 RXFP2Q8WXD0 754 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 PPP2R3CQ969Q6 453 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
TTC39A-216ENST00000530004 TLE6Q9H808 572 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 MAFFQ9ULX9 164 aa15.08■□□□□ 0
TTC39A-216ENST00000530004 LRCH4O75427 683 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 PDGFRAP16234 1089 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 CYP2F1P24903 491 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 FLT3P36888 993 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 NRIP1P48552 1158 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 ZNF143P52747 638 aaPredicted RBP15.07■□□□□ 0
TTC39A-216ENST00000530004 ADIGQ0VDE8 80 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 DUSP6Q16828 381 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 TRNP1Q6NT89 227 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 VSTM1Q6UX27 236 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 ADAT2Q7Z6V5 191 aaKnown RBP15.07■□□□□ 0
TTC39A-216ENST00000530004 KATNAL2Q8IYT4 538 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 TTC9BQ8N6N2 239 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 KCTD13Q8WZ19 329 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 KHSRPQ92945 711 aaKnown RBP eCLIP15.07■□□□□ 0
TTC39A-216ENST00000530004 SMARCD1Q96GM5 515 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 PNKPQ96T60 521 aa15.07■□□□□ 0
TTC39A-216ENST00000530004 KRT12Q99456 494 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms