RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 CPQQ9Y646 472 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 CHD8Q9HCK8 2581 aa16.32■□□□□ 0.2
CCDC90B-215ENST00000529745 COCHO43405 550 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 PAPSS2O95340 614 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 PAEPP09466 180 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 ARSAP15289 507 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 PSEN1P49768 467 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 IFRD2Q12894 506 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 PUM1Q14671 1186 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 TMEM196Q5HYL7 178 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 RAB41Q5JT25 222 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 KLHDC10Q6PID8 442 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 JAKMIP2Q96AA8 810 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 SPATA6Q9NWH7 488 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 CHORDC1Q9UHD1 332 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-215ENST00000529745 E2F8A0AVK6 867 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 SLC9A3R1O14745 358 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 NFATC1O95644 943 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 VDRP11473 427 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 GJA4P35212 333 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 MTAPQ13126 283 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 PON2Q15165 354 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 SGO2Q562F6 1265 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 IRF2BP1Q8IU81 584 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 SPEM1Q8N4L4 309 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 OTUB2Q96DC9 234 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 FAM126AQ9BYI3 521 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 CNTN6Q9UQ52 1028 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 WNT6Q9Y6F9 365 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 SPTBN2O15020 2390 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
CCDC90B-215ENST00000529745 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 TLR5O60602 858 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 ABL1P00519 1130 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 MBL2P11226 248 aaPredicted RBP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 TDGF1P13385 188 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 PRKCSHP14314 528 aaPredicted RBP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 CCR3P51677 355 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 BCAT1P54687 386 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 NR1H3Q13133 447 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 GAS6Q14393 721 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 PKDCCQ504Y2 493 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 ZC3H14Q6PJT7 736 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 TTC30AQ86WT1 665 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 ADGRG2Q8IZP9 1017 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 ZBTB44Q8NCP5 570 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 TTC8Q8TAM2 541 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 IPO9Q96P70 1041 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 THAP9Q9H5L6 903 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 CCSER2Q9H7U1 834 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 CLIC5Q9NZA1 410 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 TBC1D14Q9P2M4 693 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 TSPAN16Q9UKR8 245 aa16.29■□□□□ 0.2
CCDC90B-215ENST00000529745 O00370 1275 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 XPO1O14980 1071 aaKnown RBP16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 DRD1P21728 446 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 PGFP49763 221 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 ZNF132P52740 706 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 SLC8A3P57103 927 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 LRMPQ12912 555 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 STILQ15468 1287 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 GAB4Q2WGN9 574 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 DPCR1Q3MIW9 517 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 PM20D1Q6GTS8 502 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 FSTL4Q6MZW2 842 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 SCML4Q8N228 414 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 FAM81BQ96LP2 452 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 LINC00597Q9H2U6 94 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 OSER1Q9NX31 292 aa16.28■□□□□ 0.2
CCDC90B-215ENST00000529745 ATRXP46100 2492 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 CHURC1-FNTBB4DL54 471 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 CYP26A1O43174 497 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 LILRB5O75023 590 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 SETSIPP0DME0 302 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 ATP5C1P36542 298 aaKnown RBP16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 EIF2DP41214 584 aaKnown RBP16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 PLA2G4AP47712 749 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 GRSF1Q12849 480 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 PPP2R5DQ14738 602 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 CNGA2Q16280 664 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 MEA1Q16626 185 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 FBXO43Q4G163 708 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 LCLAT1Q6UWP7 414 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 HTR3DQ70Z44 454 aa16.27■□□□□ 0.2
CCDC90B-215ENST00000529745 ENOSF1Q7L5Y1 443 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms