RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 UNC5CO95185 931 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 KIF20AO95235 890 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 NUDT3O95989 172 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 MMP10P09238 476 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 EGR2P11161 476 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 GYS1P13807 737 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 SLC7A1P30825 629 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 VAV2P52735 878 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 BOP1Q14137 746 aaKnown RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 HLXQ14774 488 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 C1orf141Q5JVX7 400 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 TAPT1Q6NXT6 567 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 ZNF530Q6P9A1 599 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 ZNF783Q6ZMS7 281 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 CCDC146Q8IYE0 955 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 OR6B3Q8NGW1 331 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 RNF31Q96EP0 1072 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 TRIB1Q96RU8 372 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 CHST12Q9NRB3 414 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 AFF4Q9UHB7 1163 aaKnown RBP5.75□□□□□ -1.49
CSDE1-212ENST00000529046 CDYLQ9Y232 598 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 PCDHGB6Q9Y5F9 930 aa5.75□□□□□ -1.49
CSDE1-212ENST00000529046 C10orf71Q711Q0 1435 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 DCLK1O15075 740 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 TM4SF1P30408 202 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 RFC4P35249 363 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 TNNT2P45379 298 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 CRKLP46109 303 aaKnown RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 CASP5P51878 434 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 SEC24CP53992 1094 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 SUMO3P55854 103 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 HTRA4P83105 476 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 CTBP1Q13363 440 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 DYRK1AQ13627 763 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 SULT6B1Q6IMI4 303 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 FOXR2Q6PJQ5 311 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 OLFML1Q6UWY5 402 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 KSR2Q6VAB6 950 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 CLNKQ7Z7G1 428 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 GAS2L3Q86XJ1 694 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 FAM109AQ8N4B1 249 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 PSD4Q8NDX1 1056 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 SMOQ99835 787 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 HEPHQ9BQS7 1158 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 MESP1Q9BRJ9 268 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 UNKQ9C0B0 810 aaKnown RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 ZNF518BQ9C0D4 1074 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 RIOX1Q9H6W3 641 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 UNKLQ9H9P5 680 aaKnown RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 GALNT9Q9HCQ5 603 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 CPNE7Q9UBL6 633 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 TESQ9UGI8 421 aaKnown RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 EPN1Q9Y6I3 576 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-212ENST00000529046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.74□□□□□ -1.495e-9■■□□□ 13.4
CSDE1-212ENST00000529046 KIF13BQ9NQT8 1826 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 ATP10DQ9P241 1426 aa5.74□□□□□ -1.49
CSDE1-212ENST00000529046 PXDNLA1KZ92 1463 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 MBD3L4A6NDZ8 208 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-212ENST00000529046 MBD3L3A6NE82 208 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-212ENST00000529046 M0QYG6 137 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 POLRMTO00411 1230 aaKnown RBP5.73□□□□□ -1.49
CSDE1-212ENST00000529046 GRPP07492 148 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 KCNA3P22001 575 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 ALDH5A1P51649 535 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-212ENST00000529046 MC2RQ01718 297 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 UBE4AQ14139 1066 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 TAF2Q6P1X5 1199 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 GPR149Q86SP6 731 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 RNF152Q8N8N0 203 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 STRBPQ96SI9 672 aaKnown RBP5.73□□□□□ -1.49
CSDE1-212ENST00000529046 OSBPL9Q96SU4 736 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 COLEC11Q9BWP8 271 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 KIAA1586Q9HCI6 787 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 XPR1Q9UBH6 696 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 KIF7Q2M1P5 1343 aa5.73□□□□□ -1.49
CSDE1-212ENST00000529046 USP42Q9H9J4 1324 aaKnown RBP5.73□□□□□ -1.49
CSDE1-212ENST00000529046 MRC1P22897 1456 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 COL5A3P25940 1745 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-212ENST00000529046 ZAR1LA6NP61 321 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 RNMTO43148 476 aaKnown RBP5.72□□□□□ -1.49
CSDE1-212ENST00000529046 CYP19A1P11511 503 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-212ENST00000529046 CYP2C9P11712 490 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 PIK3CBP42338 1070 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 KCNJ5P48544 419 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 UCP3P55916 312 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 RPS7P62081 194 aaKnown RBP5.72□□□□□ -1.49
CSDE1-212ENST00000529046 ZNF543Q08ER8 600 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 FOXI1Q12951 378 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 SLC13A2Q13183 592 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 GEN1Q17RS7 908 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 LMBRD2Q68DH5 695 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-212ENST00000529046 MICALCLQ6ZW33 695 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 SMIM5Q71RC9 77 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 ZNF575Q86XF7 245 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 ADGRG5Q8IZF4 528 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 LNX2Q8N448 690 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 SLC44A3Q8N4M1 653 aa5.72□□□□□ -1.49
CSDE1-212ENST00000529046 TEX13AQ9BXU3 409 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-212ENST00000529046 XPNPEP3Q9NQH7 507 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms