RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 NAGPAQ9UK23 515 aa7.56□□□□□ -1.2
ITGB1-218ENST00000528877 CA14Q9ULX7 337 aa7.56□□□□□ -1.2
ITGB1-218ENST00000528877 PCDHB5Q9Y5E4 795 aa7.56□□□□□ -1.2
ITGB1-218ENST00000528877 COL4A3Q01955 1670 aa7.56□□□□□ -1.2
ITGB1-218ENST00000528877 PTPRDP23468 1912 aa7.56□□□□□ -1.2
ITGB1-218ENST00000528877 OBSL1O75147 1896 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 KANSL1LA0AUZ9 987 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 SHISA7A6NL88 538 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 PDXKO00764 312 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MAPK13O15264 365 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 NOL4O94818 638 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 GHRHP01286 108 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 PROCP04070 461 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 RPN1P04843 607 aaKnown RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MYL4P12829 197 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 GLULP15104 373 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 HMGA1P17096 107 aaKnown RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 PSMC3P17980 439 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 DDX6P26196 483 aaKnown RBP eCLIP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 ATICP31939 592 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 SYKP43405 635 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MRE11P49959 708 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 CYP2J2P51589 502 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 NDUFA8P51970 172 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 RPL10AP62906 217 aaKnown RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 BECN1Q14457 450 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 KCNB1Q14721 858 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 ANGPT1Q15389 498 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MAPRE1Q15691 268 aaKnown RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MGAT5BQ3V5L5 792 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 SLC44A4Q53GD3 710 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 SCARA3Q6AZY7 606 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 C1orf228Q6PIY5 440 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 KRBA2Q6ZNG9 492 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 TRAPPC11Q7Z392 1133 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 DNAJB7Q7Z6W7 309 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 TMEM150AQ86TG1 271 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 OSTM1Q86WC4 334 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MFSD6LQ8IWD5 586 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 NELFCDQ8IXH7 590 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 CACTIN-AS1Q8N1I8 211 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 PARD3BQ8TEW8 1205 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 NUDT8Q8WV74 236 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 CLDN23Q96B33 292 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 HPDLQ96IR7 371 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 FNBP1Q96RU3 617 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 LPIN3Q9BQK8 851 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 TRMT61BQ9BVS5 477 aaKnown RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 PLA2G2FQ9BZM2 168 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 GOLPH3LQ9H4A5 285 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 LTB4R2Q9NPC1 389 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 ABI2Q9NYB9 513 aaPredicted RBP7.55□□□□□ -1.2
ITGB1-218ENST00000528877 CDH9Q9ULB4 789 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 TRAF3IP3Q9Y228 551 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 SNX9Q9Y5X1 595 aa7.55□□□□□ -1.2
ITGB1-218ENST00000528877 MIA3Q5JRA6 1907 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 F5P12259 2224 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 LRRIQ3A6PVS8 624 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 CLIC2O15247 247 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 CHADO15335 359 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 EXOC3O60645 756 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 MMP20O60882 483 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 TADA3O75528 432 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 SOAT2O75908 522 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 KIF20AO95235 890 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 PRAMEF12O95522 483 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 ITGB2P05107 769 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 KRT19P08727 400 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 CSH1P0DML2 217 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 CSH2P0DML3 217 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 DLATP10515 647 aaKnown RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 GABRR2P28476 465 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 NLRP12P59046 1061 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 ZNF268Q14587 947 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 TRIP4Q15650 581 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 ZNF528Q3MIS6 628 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 ZCWPW2Q504Y3 356 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 ARHGAP15Q53QZ3 475 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 COBLL1Q53SF7 1204 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 STXBP5Q5T5C0 1151 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 TTC39BQ5VTQ0 682 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 TDRD10Q5VZ19 366 aaKnown RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 VSTM1Q6UX27 236 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 C4orf50Q6ZRC1 276 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 TPRG1Q6ZUI0 275 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 GUF1Q8N442 669 aaKnown RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 FSIP1Q8NA03 581 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 PLEKHO2Q8TD55 490 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 SYAP1Q96A49 352 aaPredicted RBP7.54□□□□□ -1.2
ITGB1-218ENST00000528877 RSPRY1Q96DX4 576 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 CHAMP1Q96JM3 812 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 SPATA17Q96L03 361 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 GCNAQ96QF7 691 aa7.54□□□□□ -1.2
ITGB1-218ENST00000528877 NELL2Q99435 816 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms