RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 ACTR2P61160 394 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SATB1Q01826 763 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SCAPQ12770 1279 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SLC12A1Q13621 1099 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TP53BP2Q13625 1128 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 IQCB1Q15051 598 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TOMM20Q15388 145 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 DLGAP5Q15398 846 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 LY6KQ17RY6 165 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SLC5A9Q2M3M2 681 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 FCRL6Q6DN72 434 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TTLL5Q6EMB2 1281 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 DSTYKQ6XUX3 929 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 PPP1R32Q7Z5V6 425 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 GAS2L3Q86XJ1 694 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 RASGRP3Q8IV61 690 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 MAPKAPK5Q8IW41 473 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SLC44A2Q8IWA5 706 aaPredicted RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 NRSN1Q8IZ57 195 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 OR1N1Q8NGS0 311 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 OR6Y1Q8NGX8 325 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 ZFP28Q8NHY6 868 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SCAMP5Q8TAC9 235 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TMEM171Q8WVE6 324 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SNRNP27Q8WVK2 155 aaKnown RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 TMEM125Q96AQ2 219 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SDCCAG3Q96C92 435 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 HVCN1Q96D96 273 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 RNF31Q96EP0 1072 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 COG8Q96MW5 612 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TRAPPC9Q96Q05 1148 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TRIB1Q96RU8 372 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 DDX23Q9BUQ8 820 aaKnown RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 MLST8Q9BVC4 326 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TP63Q9H3D4 680 aaPredicted RBP3.73□□□□□ -1.81
CD44-229ENST00000528672 FAM83DQ9H4H8 585 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 EPS8L2Q9H6S3 715 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 ZBTB26Q9HCK0 441 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 PRDM8Q9NQV8 689 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 HELLSQ9NRZ9 838 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TBC1D22BQ9NU19 505 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 TMOD4Q9NZQ9 345 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 DKK4Q9UBT3 224 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 HESX1Q9UBX0 185 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 POLG2Q9UHN1 485 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 ATP11BQ9Y2G3 1177 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 DTNAQ9Y4J8 743 aa3.73□□□□□ -1.81
CD44-229ENST00000528672 SALL3Q9BXA9 1300 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 CCDC196A0A1B0GTZ2 297 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 VWC2LB2RUY7 222 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 DIRC3C9JPN6 131 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 K7ENM7 598 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 AGPSO00116 658 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 CCNT2O60583 730 aaKnown RBP3.72□□□□□ -1.81
CD44-229ENST00000528672 RASAL1O95294 804 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 NTSR2O95665 410 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 DDX58O95786 925 aaKnown RBP3.72□□□□□ -1.81
CD44-229ENST00000528672 PRKCBP05771 671 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 RHOP08100 348 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 RXRAP19793 462 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 MGAT1P26572 445 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 ADORA2AP29274 412 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 NTSR1P30989 418 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 PLA2G5P39877 138 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 PRKAA2P54646 552 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 VAMP2P63027 116 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 KRT17Q04695 432 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 UBE3AQ05086 875 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 TCF15Q12870 199 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 RESTQ13127 1097 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 MGAT5BQ3V5L5 792 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 NRN1LQ496H8 165 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 RABL3Q5HYI8 236 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 FNDC7Q5VTL7 733 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 CACHD1Q5VU97 1274 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 CCDC30Q5VVM6 783 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 GDF7Q7Z4P5 450 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 RHOT2Q8IXI1 618 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 TSPYL6Q8N831 410 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 C1orf131Q8NDD1 294 aaKnown RBP3.72□□□□□ -1.81
CD44-229ENST00000528672 CSGALNACT1Q8TDX6 532 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 RSC1A1Q92681 617 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 HTRA1Q92743 480 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 GRAMD1AQ96CP6 724 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 MESP1Q9BRJ9 268 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 PLEKHA5Q9HAU0 1116 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 LPAR3Q9UBY5 353 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 SLC45A1Q9Y2W3 748 aa3.72□□□□□ -1.81
CD44-229ENST00000528672 GAGE12BA1L429 117 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ANKRD18BA2A2Z9 1011 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 A6NCN8 305 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 GAGE12HA6NDE8 117 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 H0Y3Z8 333 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 RGS10O43665 173 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 RRP9O43818 475 aaKnown RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 PIAS2O75928 621 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 RECQL4O94761 1208 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 SPDEFO95238 335 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 GPANK1O95872 356 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms