RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 DUX4Q9UBX2 424 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 USP18Q9UMW8 372 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 KRT87PA6NCN2 255 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 GRK2P25098 689 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 NR2C2P49116 596 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 EPHB3P54753 998 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 NCKAP1LP55160 1127 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 LAMTOR4Q0VGL1 99 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 NT5DC1Q5TFE4 455 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ACER1Q8TDN7 264 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 SLC20A1Q8WUM9 679 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 SLC5A5Q92911 643 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 PRMT6Q96LA8 375 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-219ENST00000528621 TBCBQ99426 244 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 ZCWPW1Q9H0M4 648 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 KCNQ5Q9NR82 932 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 IPPQ9Y573 584 aa8.77□□□□□ -1.01
CTNND1-219ENST00000528621 PMPCBO75439 489 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 IFNA14P01570 189 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 RXRGP48443 463 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CLCN3P51790 818 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DSG1Q02413 1049 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ACAP1Q15027 740 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 TMEM154Q6P9G4 183 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 GALNT4Q8N4A0 578 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 KIAA1683Q9H0B3 1180 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 IL25Q9H293 177 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 KCTD10Q9H3F6 313 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 AP4E1Q9UPM8 1137 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 MAP2P11137 1827 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 UBE2Q2LH0YL09 131 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 GUCA1CO95843 209 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 TOB1P50616 345 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ATXN3P54252 364 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF268Q14587 947 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CCDC153Q494R4 210 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ERMARDQ5T6L9 678 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 OPTNQ96CV9 577 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 FAM111AQ96PZ2 611 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 SH3GL1Q99961 368 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 AGXT2Q9BYV1 514 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 TLR8Q9NR97 1041 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PDP2Q9P2J9 529 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PRG3Q9Y2Y8 225 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ADCY3O60266 1144 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DAB1O75553 588 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 THP07101 528 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 GYS1P13807 737 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ALOX15P16050 662 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PCYT1AP49585 367 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CASP4P49662 377 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 BLVRAP53004 296 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DEFA1P59665 94 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DEFA3P59666 94 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 MRPS35P82673 323 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CSTF3Q12996 717 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CYLC2Q14093 348 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PREPLQ4J6C6 727 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PRMT9Q6P2P2 845 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 NMRK2Q9NPI5 230 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CHST12Q9NRB3 414 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 TFR2Q9UP52 801 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.76□□□□□ -1.013e-9■□□□□ 10.4
CTNND1-219ENST00000528621 ADGRB2O60241 1585 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PAEPP09466 180 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF286BP0CG31 522 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CKBP12277 381 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 FCGR1AP12314 374 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DNAJB2P25686 324 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 EPHX2P34913 555 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 NUDT2P50583 147 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 IRAK1P51617 712 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 OTUD4Q01804 1114 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 LRRC36Q1X8D7 754 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 FUT11Q495W5 492 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 SPANXN3Q5MJ09 141 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ZNF280DQ6N043 979 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ATP8B4Q8TF62 1192 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 RIN2Q8WYP3 895 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 VTA1Q9NP79 307 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ADGRA3Q8IWK6 1321 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 DCDC2CA8MYV0 355 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 VPS4BO75351 444 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 USP1O94782 785 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 URODP06132 367 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 RHOCP08134 193 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 ITGALP20701 1170 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 TRPC1P48995 793 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 MAD2L1Q13257 205 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 PAN2Q504Q3 1202 aaKnown RBP8.76□□□□□ -1.01
CTNND1-219ENST00000528621 SLC47A2Q86VL8 602 aa8.76□□□□□ -1.01
CTNND1-219ENST00000528621 CYP4Z1Q86W10 505 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms