RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SNX30Q5VWJ9 437 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 RASSF3Q86WH2 238 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 TMEM25Q86YD3 366 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 BBS7Q8IWZ6 715 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 FRMD1Q8N878 549 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 KIAA1958Q8N8K9 716 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 IL17RCQ8NAC3 791 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 PDZD8Q8NEN9 1154 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 MDGA1Q8NFP4 955 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 TMC2Q8TDI7 906 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 RLN3Q8WXF3 142 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 OVCA2Q8WZ82 227 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 ARHGEF4Q9NR80 690 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 VPS45Q9NRW7 570 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 TBC1D14Q9P2M4 693 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 CHD8Q9HCK8 2581 aa16.45■□□□□ 0.22
CLNS1A-210ENST00000528364 A0A0A0MRY4 1105 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 FAM92AA1XBS5 289 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 CAVIN2O95810 425 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 ADH1CP00326 375 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 ASS1P00966 412 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 APODP05090 189 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 KIR2DL1P43626 348 aaPredicted RBP16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 ASPAP45381 313 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 NDUFA8P51970 172 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 LIMK1P53667 647 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 MRPS21P82921 87 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 N4BP2L1Q5TBK1 243 aaPredicted RBP16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 GPRIN1Q7Z2K8 1008 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 DDX42Q86XP3 938 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 PHTF2Q8N3S3 785 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 CCDC26Q8TAB7 109 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 TMEM174Q8WUU8 243 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 JAKMIP2Q96AA8 810 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 SPATA32Q96LK8 384 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 OSER1Q9NX31 292 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 SH3BP1Q9Y3L3 701 aa16.44■□□□□ 0.22
CLNS1A-210ENST00000528364 MAP1BP46821 2468 aaKnown RBP16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 NUP205Q92621 2012 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 ADAM23O75077 832 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 TRIM49P0CI25 452 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 TRIM49CP0CI26 452 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 GRIA2P42262 883 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 GCLMP48507 274 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 VAMP7P51809 220 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 GAD2Q05329 585 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 USP25Q9UHP3 1055 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 NUDT5Q9UKK9 219 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 HCN2Q9UL51 889 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 TRAF3IP3Q9Y228 551 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 FRMD4BQ9Y2L6 1034 aa16.43■□□□□ 0.22
CLNS1A-210ENST00000528364 TBC1D3BA6NDS4 549 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 PATE3B3GLJ2 98 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 HHLA1C9JL84 531 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 IKBKBO14920 756 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 CALUO43852 315 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 GREM1O60565 184 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 TULP3O75386 442 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 KRT37O76014 449 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 P4HA1P13674 534 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 PIK3CAP42336 1068 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 SYKP43405 635 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 TNFRSF4P43489 277 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 DHPSP49366 369 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 ANO4Q32M45 955 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 PMS2CLQ68D20 193 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 UNC93AQ86WB7 457 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 ETFBKMTQ8IXQ9 262 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 OLIG1Q8TAK6 271 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 WHAMMQ8TF30 809 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 TAF4BQ92750 862 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 ERLEC1Q96DZ1 483 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 KLF16Q9BXK1 252 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 NACA2Q9H009 215 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 MMRN2Q9H8L6 949 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 NMUR1Q9HB89 426 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 SPHK2Q9NRA0 654 aa16.42■□□□□ 0.22
CLNS1A-210ENST00000528364 C4orf47A7E2U8 309 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 MDM4O15151 490 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 TLR5O60602 858 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 RHOBTB3O94955 611 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 CD58P19256 250 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 NR2F2P24468 414 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 WASP42768 502 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 TUBP50607 506 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 DPYDQ12882 1025 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 CLEC20AQ6ZU45 233 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 HMGB4Q8WW32 186 aa16.41■□□□□ 0.22
CLNS1A-210ENST00000528364 OTUB2Q96DC9 234 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms