RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CHFRQ96EP1 664 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 FAM81BQ96LP2 452 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 CCSER2Q9H7U1 834 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 PRMT8Q9NR22 394 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 SMPD4Q9NXE4 827 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 HESX1Q9UBX0 185 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.37
TRAPPC4-209ENST00000528230 GOLGA6L22H0YM25 854 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 TLR5O60602 858 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 DRD1P21728 446 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 ATP5C1P36542 298 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CXCL12P48061 93 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 GALK1P51570 392 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 BCAT1P54687 386 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CSTF1Q05048 431 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 STILQ15468 1287 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CNGA2Q16280 664 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 FBXO43Q4G163 708 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 TMEM270Q6UE05 265 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 PIGZQ86VD9 579 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 IRF2BP1Q8IU81 584 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 FAM114A1Q8IWE2 563 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 TTC16Q8NEE8 873 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 NKD2Q969F2 451 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZFRQ96KR1 1074 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CDK5RAP1Q96SZ6 601 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 P2RY13Q9BPV8 354 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 NACA2Q9H009 215 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 THAP9Q9H5L6 903 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CLIC5Q9NZA1 410 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CFAP97Q9P2B7 532 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 CNTN6Q9UQ52 1028 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 PCDHB4Q9Y5E5 795 aa12.76□□□□□ -0.37
TRAPPC4-209ENST00000528230 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 O00370 1275 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 CYP26A1O43174 497 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 PAPSS2O95340 614 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 RALAP11233 206 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 CD19P15391 556 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 PLA2G4AP47712 749 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 PGFP49763 221 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 NRLP54845 237 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 GOLGA8FQ08AF8 430 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 GOLGA8DPQ0D2H9 430 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 BST2Q10589 180 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 GAS6Q14393 721 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 TPD52L1Q16890 204 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 PM20D1Q6GTS8 502 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 LCLAT1Q6UWP7 414 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 HTR3DQ70Z44 454 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 RRAGAQ7L523 313 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 ENOSF1Q7L5Y1 443 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 ARHGAP18Q8N392 663 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 CCDC26Q8TAB7 109 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 CD101Q93033 1021 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 ATG2BQ96BY7 2078 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 KLF16Q9BXK1 252 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 INTS2Q9H0H0 1204 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 NMUR1Q9HB89 426 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 RBM12Q9NTZ6 932 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 OSER1Q9NX31 292 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 SH3BP1Q9Y3L3 701 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 PCDHGA2Q9Y5H1 932 aa12.75□□□□□ -0.37
TRAPPC4-209ENST00000528230 A0A1W2PQH9 124 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 GFRA3O60609 400 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 ATG13O75143 517 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 RARGP13631 454 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZNF132P52740 706 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 PDE4CQ08493 712 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 DHCR24Q15392 516 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 RHBDF2Q6PJF5 856 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 SCD5Q86SK9 330 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 ARHGEF19Q8IW93 802 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 SCML4Q8N228 414 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 KAT5Q92993 513 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 KREMEN1Q96MU8 473 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZSCAN32Q9NX65 697 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 DNMT3LQ9UJW3 386 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 NAGPAQ9UK23 515 aa12.74□□□□□ -0.37
TRAPPC4-209ENST00000528230 PRR23AA6NEV1 266 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 CHURC1-FNTBB4DL54 471 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 LILRB5O75023 590 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 TBX18O95935 607 aa12.73□□□□□ -0.37
TRAPPC4-209ENST00000528230 ZBED1O96006 694 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms