RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KLC3Q6P597 504 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 THNSL1Q8IYQ7 743 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 SAMD3Q8N6K7 520 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 TMEM35BQ8NCS4 154 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 APBB2Q92870 758 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 GCNAQ96QF7 691 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 SIKE1Q9BRV8 207 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 CYP4F11Q9HBI6 524 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 PNPLA8Q9NP80 782 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 CDH22Q9UJ99 828 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 APOBEC2Q9Y235 224 aaKnown RBP15.23■□□□□ 0.03
CAPN1-214ENST00000528165 NUB1Q9Y5A7 615 aa15.23■□□□□ 0.03
CAPN1-214ENST00000528165 RFPL1O75677 317 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 LSM8O95777 96 aaKnown RBP15.22■□□□□ 0.03
CAPN1-214ENST00000528165 CCDC166P0CW27 439 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 SMIM18P0DKX4 95 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 KDELR1P24390 212 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 WNT7BP56706 349 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 USP6NLQ92738 828 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-214ENST00000528165 DTNAQ9Y4J8 743 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 TTLL3Q9Y4R7 772 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 PTPRJQ12913 1337 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 A0A0B4J269 797 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 CXorf49A8MYA2 514 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-214ENST00000528165 VILLO15195 856 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 BIRC5O15392 142 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 PEX1O43933 1283 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 TOM1L1O75674 476 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 KRT38O76015 456 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 SORBS2O94875 1100 aaKnown RBP15.22■□□□□ 0.03
CAPN1-214ENST00000528165 SETSIPP0DME0 302 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 HPCAP84074 193 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 ACBD5Q5T8D3 534 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-214ENST00000528165 CYP4A22Q5TCH4 519 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 DENND5BQ6ZUT9 1274 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 ARCQ7LC44 396 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 NDUFAF2Q8N183 169 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 ACTRT2Q8TDY3 377 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 FAF2Q96CS3 445 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 MKS1Q9NXB0 559 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
CAPN1-214ENST00000528165 WDR64B1ANS9 1081 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 APOC4-APOC2K7ER74 178 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 APOC2P02655 101 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 FDFT1P37268 417 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 HSD17B4P51659 736 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 JAK3P52333 1124 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 NLRP11P59045 1033 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 SLC25A11Q02978 314 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 HSP90AA5PQ58FG0 334 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 C1orf228Q6PIY5 440 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 ANO5Q75V66 913 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 TMC7Q7Z402 723 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 CCDC33Q8N5R6 958 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 SPATA18Q8TC71 538 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 CEP170P1Q96L14 293 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 CATSPER2Q96P56 530 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 Q9H521 79 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 ITGA11Q9UKX5 1188 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 POMPQ9Y244 141 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 TMX2Q9Y320 296 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 UBIAD1Q9Y5Z9 338 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 RPS6KL1Q9Y6S9 549 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 KAT6AQ92794 2004 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 CAPN8A6NHC0 703 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 CASQ2O14958 399 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 STRNO43815 780 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 IL1R2P27930 398 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 KCNJ11Q14654 390 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 ZYXQ15942 572 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 TCHHL1Q5QJ38 904 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 PGM2L1Q6PCE3 622 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 DARS2Q6PI48 645 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 KLHDC10Q6PID8 442 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 KCTD6Q8NC69 237 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 PIWIL2Q8TC59 973 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 AGBL1Q96MI9 1066 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 PLEKHG4BQ96PX9 1271 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 HOMER2Q9NSB8 354 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 DDX18Q9NVP1 670 aaKnown RBP15.21■□□□□ 0.03
CAPN1-214ENST00000528165 INPP5FQ9Y2H2 1132 aa15.21■□□□□ 0.03
CAPN1-214ENST00000528165 BTBD19C9JJ37 291 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 LRCH4O75427 683 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 TFAP2AP05549 437 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 CD48P09326 243 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 ROR1Q01973 937 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 CSRNP1Q96S65 589 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 SHCBP1LQ9BZQ2 653 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 USP29Q9HBJ7 922 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 AGO2Q9UKV8 859 aaKnown RBP15.21■□□□□ 0.02
CAPN1-214ENST00000528165 LZTS1Q9Y250 596 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 DNAJC16Q9Y2G8 782 aa15.21■□□□□ 0.02
CAPN1-214ENST00000528165 SF3B1O75533 1304 aaKnown RBP eCLIP15.2■□□□□ 0.021e-7■■■■■ 172.3
CAPN1-214ENST00000528165 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
CAPN1-214ENST00000528165 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
CAPN1-214ENST00000528165 SIN3BO75182 1162 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms