RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 CYP17A1P05093 508 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 CD58P19256 250 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 ATP5C1P36542 298 aaKnown RBP24.43■■□□□ 1.5
PKP3-206ENST00000528036 GAD2Q05329 585 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 ORC1Q13415 861 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 WHAMMQ8TF30 809 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 LOXL4Q96JB6 756 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 HEXIM2Q96MH2 286 aaKnown RBP24.43■■□□□ 1.5
PKP3-206ENST00000528036 TWNKQ96RR1 684 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 CISHQ9NSE2 258 aa24.43■■□□□ 1.5
PKP3-206ENST00000528036 BEST1O76090 585 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 OPRD1P41143 372 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 MRPS21P82921 87 aaKnown RBP24.42■■□□□ 1.5
PKP3-206ENST00000528036 CETN1Q12798 172 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 DCAF17Q5H9S7 520 aaPredicted RBP24.42■■□□□ 1.5
PKP3-206ENST00000528036 BTBD8Q5XKL5 378 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 HEATR6Q6AI08 1181 aaKnown RBP24.42■■□□□ 1.5
PKP3-206ENST00000528036 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.42■■□□□ 1.5
PKP3-206ENST00000528036 RPLP0P6Q8NHW5 317 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 GAB3Q8WWW8 586 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 TMEM176AQ96HP8 235 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 PNKPQ96T60 521 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 CCSER2Q9H7U1 834 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 EBF1Q9UH73 591 aa24.42■■□□□ 1.5
PKP3-206ENST00000528036 LSM7Q9UK45 103 aaKnown RBP24.42■■□□□ 1.5
PKP3-206ENST00000528036 A0A0A0MRY4 1105 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 BICDL2A1A5D9 508 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 PMM2O15305 246 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 APBB3O95704 486 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 APODP05090 189 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 ADH5P11766 374 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 ACO1P21399 889 aaKnown RBP24.41■■□□□ 1.5
PKP3-206ENST00000528036 KIF11P52732 1056 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 DMWDQ09019 674 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 RHBDF2Q6PJF5 856 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 CACNA2D4Q7Z3S7 1137 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 ARHGAP18Q8N392 663 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 KCNV2Q8TDN2 545 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 SEMA4DQ92854 862 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 EEF2KMTQ96G04 330 aa24.41■■□□□ 1.5
PKP3-206ENST00000528036 ZFRQ96KR1 1074 aaKnown RBP24.41■■□□□ 1.5
PKP3-206ENST00000528036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.41■■□□□ 1.52e-6■■■■■ 352.1
PKP3-206ENST00000528036 HHLA1C9JL84 531 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 RALAP11233 206 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 TBXAS1P24557 533 aaPredicted RBP24.4■■□□□ 1.5
PKP3-206ENST00000528036 GRIA2P42262 883 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 DMC1Q14565 340 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 ARHGAP17Q68EM7 881 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 PKN3Q6P5Z2 889 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 HTR3DQ70Z44 454 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 CCDC186Q7Z3E2 898 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 C11orf74Q86VG3 221 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 USP33Q8TEY7 942 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 C2orf42Q9NWW7 574 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 CLIC5Q9NZA1 410 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 DNMT3LQ9UJW3 386 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 KIAA1257Q9ULG3 409 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 USP18Q9UMW8 372 aa24.4■■□□□ 1.5
PKP3-206ENST00000528036 AXIN1O15169 862 aa24.39■■□□□ 1.49
PKP3-206ENST00000528036 HOXC11O43248 304 aaPredicted RBP24.39■■□□□ 1.49
PKP3-206ENST00000528036 RPP40O75818 363 aaKnown RBP24.39■■□□□ 1.49
PKP3-206ENST00000528036 TNFRSF4P43489 277 aa24.39■■□□□ 1.49
PKP3-206ENST00000528036 PLA2G4AP47712 749 aa24.39■■□□□ 1.49
PKP3-206ENST00000528036 PPP1R26Q5T8A7 1209 aaPredicted RBP24.39■■□□□ 1.49
PKP3-206ENST00000528036 USP3Q9Y6I4 520 aa24.39■■□□□ 1.49
PKP3-206ENST00000528036 SPTBN4Q9H254 2564 aa24.39■■□□□ 1.49
PKP3-206ENST00000528036 HELZP42694 1942 aaKnown RBP24.38■■□□□ 1.49
PKP3-206ENST00000528036 P4HA2O15460 535 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 GNA14O95837 355 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 CCDC192P0DO97 292 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 GAB4Q2WGN9 574 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 ZNF394Q53GI3 561 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 ANKRD52Q8NB46 1076 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 SLC35C1Q96A29 364 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 KLF16Q9BXK1 252 aaPredicted RBP24.38■■□□□ 1.49
PKP3-206ENST00000528036 SPHK2Q9NRA0 654 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 DLL3Q9NYJ7 618 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 MAN1B1Q9UKM7 699 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 ZNF510Q9Y2H8 683 aa24.38■■□□□ 1.49
PKP3-206ENST00000528036 K7EQS6 105 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 KAT7O95251 611 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 DGKEP52429 567 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 RAD23BP54727 409 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 CUL2Q13617 745 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 CBWD6Q4V339 395 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 CBWD3Q5JTY5 395 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 CBWD5Q5RIA9 395 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 LY6G5CQ5SRR4 150 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 NAIF1Q69YI7 327 aaPredicted RBP24.37■■□□□ 1.49
PKP3-206ENST00000528036 TRMT11Q7Z4G4 463 aaKnown RBP24.37■■□□□ 1.49
PKP3-206ENST00000528036 SLC4A11Q8NBS3 891 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 EZH1Q92800 747 aaPredicted RBP24.37■■□□□ 1.49
PKP3-206ENST00000528036 RMDN1Q96DB5 314 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 ARHGEF4Q9NR80 690 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.37■■□□□ 1.49
PKP3-206ENST00000528036 WDR35Q9P2L0 1181 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 MMP17Q9ULZ9 603 aa24.37■■□□□ 1.49
PKP3-206ENST00000528036 ALDH1A2O94788 518 aa24.36■■□□□ 1.49
PKP3-206ENST00000528036 FGFR1OPO95684 399 aaKnown RBP24.36■■□□□ 1.49
PKP3-206ENST00000528036 RARGP13631 454 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms