RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 EBF3Q9H4W6 596 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 APOBEC3GQ9HC16 384 aaKnown RBP11.78□□□□□ -0.52
NR1H3-230ENST00000527949 TRPC7Q9HCX4 862 aa11.78□□□□□ -0.52
NR1H3-230ENST00000527949 MAP1BP46821 2468 aaKnown RBP11.78□□□□□ -0.52
NR1H3-230ENST00000527949 SPAG17Q6Q759 2223 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 E2F8A0AVK6 867 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 OTOL1A6NHN0 477 aaPredicted RBP11.77□□□□□ -0.53
NR1H3-230ENST00000527949 LEFTY2O00292 366 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 PSMA7O14818 248 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 AP1G2O75843 785 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 ARSAP15289 507 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 GJA4P35212 333 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 EIF2DP41214 584 aaKnown RBP11.77□□□□□ -0.53
NR1H3-230ENST00000527949 MXI1P50539 228 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 SLC5A3P53794 718 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 STIM1Q13586 685 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 FSTL4Q6MZW2 842 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 KLHDC10Q6PID8 442 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 SCARA5Q6ZMJ2 495 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 KBTBD6Q86V97 674 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 SLC2A14Q8TDB8 520 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 FBXO32Q969P5 355 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 CEP63Q96MT8 703 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 KCNK16Q96T55 309 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 SMOQ99835 787 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 P2RY13Q9BPV8 354 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 MED10Q9BTT4 135 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 METTL14Q9HCE5 456 aaKnown RBP11.77□□□□□ -0.53
NR1H3-230ENST00000527949 KRT82Q9NSB4 513 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 RAB20Q9NX57 234 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 TBC1D14Q9P2M4 693 aa11.77□□□□□ -0.53
NR1H3-230ENST00000527949 FAM200BP0CF97 657 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 CEACAM1P13688 526 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
NR1H3-230ENST00000527949 ZXDBP98169 803 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 ACAP1Q15027 740 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 HECTD3Q5T447 861 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 TRIM68Q6AZZ1 485 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 SMYD5Q6GMV2 418 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 SPOPLQ6IQ16 392 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 SMYD4Q8IYR2 804 aaPredicted RBP11.76□□□□□ -0.53
NR1H3-230ENST00000527949 WHAMMQ8TF30 809 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 CD101Q93033 1021 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 CYFIP2Q96F07 1278 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 EDEM2Q9BV94 578 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 RNF38Q9H0F5 515 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 ZMIZ1Q9ULJ6 1067 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 SCML2Q9UQR0 700 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 CPQQ9Y646 472 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 WNT6Q9Y6F9 365 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 CFAP47Q6ZTR5 3102 aa11.76□□□□□ -0.53
NR1H3-230ENST00000527949 KIAA1549LQ6ZVL6 1849 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 A0A0A0MRY4 1105 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 HHLA1C9JL84 531 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 CCDC130P13994 396 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 CSRP1P21291 193 aaKnown RBP11.75□□□□□ -0.53
NR1H3-230ENST00000527949 PSEN1P49768 467 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 GALK1P51570 392 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 COL9A2Q14055 689 aaPredicted RBP11.75□□□□□ -0.53
NR1H3-230ENST00000527949 PLK5Q496M5 336 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 HSF5Q4G112 596 aaPredicted RBP11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ANKRD40Q6AI12 368 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 CLEC20AQ6ZU45 233 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 FILIP1Q7Z7B0 1213 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ADGRG2Q8IZP9 1017 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 SCAMP5Q8TAC9 235 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 TTC8Q8TAM2 541 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 SEMA4DQ92854 862 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 SLC35C1Q96A29 364 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ACDQ96AP0 544 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
NR1H3-230ENST00000527949 TWNKQ96RR1 684 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 TLR8Q9NR97 1041 aaKnown RBP11.75□□□□□ -0.53
NR1H3-230ENST00000527949 RXFP3Q9NSD7 469 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ARMCX3Q9UH62 379 aaPredicted RBP11.75□□□□□ -0.53
NR1H3-230ENST00000527949 EBF1Q9UH73 591 aa11.75□□□□□ -0.53
NR1H3-230ENST00000527949 ATG2BQ96BY7 2078 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 P4HA2O15460 535 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 COCHO43405 550 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 BEST1O76090 585 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 CLSTN1O94985 981 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 APBB3O95704 486 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 CAVIN2O95810 425 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 ADH1CP00326 375 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 MBL2P11226 248 aaPredicted RBP11.74□□□□□ -0.53
NR1H3-230ENST00000527949 OPRD1P41143 372 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 KIF11P52732 1056 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 YWHAEP62258 255 aaKnown RBP11.74□□□□□ -0.53
NR1H3-230ENST00000527949 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 SYT13Q7L8C5 426 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 CCDC186Q7Z3E2 898 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 C12orf29Q8N999 325 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 TRIML1Q8N9V2 468 aa11.74□□□□□ -0.53
NR1H3-230ENST00000527949 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
NR1H3-230ENST00000527949 DUSP16Q9BY84 665 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms