RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SNX30Q5VWJ9 437 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 RNF43Q68DV7 783 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 SPOPLQ6IQ16 392 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 C12orf40Q86WS4 652 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 SFTPA1Q8IWL2 248 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 CRYBG2Q8N1P7 616 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 C12orf29Q8N999 325 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 SMOQ99835 787 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 IL37Q9NZH6 218 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 THADAQ6YHU6 1953 aa23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 TPRP12270 2363 aaKnown RBP23.69■■□□□ 1.38
TRAPPC4-208ENST00000527680 BCLAF3A2AJT9 711 aaKnown RBP23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 BEST1O76090 585 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 HLA-DRAP01903 254 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 ADORA2BP29275 332 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 TNFRSF4P43489 277 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 VAMP7P51809 220 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 KRT85P78386 507 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 EOGTQ5NDL2 527 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 TCEAL6Q6IPX3 200 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 TMEM92Q6UXU6 159 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 NUDT18Q6ZVK8 323 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 UNC93AQ86WB7 457 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 PGBD3Q8N328 593 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 TMEM174Q8WUU8 243 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 TCEAL3Q969E4 200 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 CHAMP1Q96JM3 812 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 CNOT6LQ96LI5 555 aaKnown RBP23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 IMPG2Q9BZV3 1241 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 POLMQ9NP87 494 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 TLR8Q9NR97 1041 aaKnown RBP23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 BCCIPQ9P287 314 aaKnown RBP eCLIP23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 MAPK8IP1Q9UQF2 711 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 KIAA1549LQ6ZVL6 1849 aa23.68■■□□□ 1.38
TRAPPC4-208ENST00000527680 MAP3K13O43283 966 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 ASS1P00966 412 aaKnown RBP23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 FAM200BP0CF97 657 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 TUBP50607 506 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 MESP2Q0VG99 397 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 PREPLQ4J6C6 727 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 RASSF3Q86WH2 238 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 BBS7Q8IWZ6 715 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 IL17RCQ8NAC3 791 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 ZMIZ2Q8NF64 920 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 MDGA1Q8NFP4 955 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 JAKMIP2Q96AA8 810 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 MMRN2Q9H8L6 949 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 ZDHHC4Q9NPG8 344 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 DEC1Q9P2X7 70 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 HMGXB4Q9UGU5 601 aa23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 CNOT1A5YKK6 2376 aaKnown RBP23.67■■□□□ 1.38
TRAPPC4-208ENST00000527680 MYO18AQ92614 2054 aaKnown RBP23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 A0A0A0MRY4 1105 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 SGK1O00141 431 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 TLR5O60602 858 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 KRT13P13646 458 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 NR2F2P24468 414 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 DHPSP49366 369 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 HSF5Q4G112 596 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 CCDC150Q8NCX0 1101 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 ZFRQ96KR1 1074 aaKnown RBP23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 SPHK2Q9NRA0 654 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 TRAF3IP3Q9Y228 551 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 HPSEQ9Y251 543 aa23.66■■□□□ 1.38
TRAPPC4-208ENST00000527680 TBX18O95935 607 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 ZDHHC11BP0C7U3 371 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 RPL13P26373 211 aaKnown RBP23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 ASPAP45381 313 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 GCLMP48507 274 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 NDUFA8P51970 172 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 PMS2CLQ68D20 193 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 TMEM25Q86YD3 366 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 RLN3Q8WXF3 142 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 CYFIP2Q96F07 1278 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 DNAI2Q9GZS0 605 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 CSNK1G1Q9HCP0 422 aa23.65■■□□□ 1.38
TRAPPC4-208ENST00000527680 FAM92AA1XBS5 289 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 TM4SF5O14894 197 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 KHNYNO15037 678 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 TULP3O75386 442 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 PRR29P0C7W0 189 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 HNRNPLP14866 589 aaKnown RBP eCLIP23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 BCKDHBP21953 392 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 ATP5C1P36542 298 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 KIR2DL1P43626 348 aaPredicted RBP23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 GOLGA8FQ08AF8 430 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 GOLGA8DPQ0D2H9 430 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 C1orf220Q5T0J3 134 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 INTS8Q75QN2 995 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 CYP2U1Q7Z449 544 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 WHAMMQ8TF30 809 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 HMGB4Q8WW32 186 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 WBP2Q969T9 261 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 SPACA7Q96KW9 195 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 HNRNPABQ99729 332 aaKnown RBP23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 EDEM2Q9BV94 578 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 NT5C1AQ9BXI3 368 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 NUP205Q92621 2012 aa23.64■■□□□ 1.37
TRAPPC4-208ENST00000527680 C4orf47A7E2U8 309 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 MAPK13O15264 365 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms