RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 BCAT1P54687 386 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 GRSF1Q12849 480 aaKnown RBP eCLIP27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 CCINQ13939 588 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 GOLGA7BQ2TAP0 167 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 TMEM196Q5HYL7 178 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 PIGZQ86VD9 579 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 TTC30AQ86WT1 665 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 ARHGEF19Q8IW93 802 aa27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 RBM12Q9NTZ6 932 aaKnown RBP27.77■■■□□ 2.04
TSPAN4-217ENST00000527644 E2F8A0AVK6 867 aa27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 ATP5C1P36542 298 aaKnown RBP27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 CSTF1Q05048 431 aaKnown RBP27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 RAB41Q5JT25 222 aa27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 FAM114A1Q8IWE2 563 aa27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 ADGRG2Q8IZP9 1017 aa27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 PRMT8Q9NR22 394 aaPredicted RBP27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 OSER1Q9NX31 292 aa27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 TBC1D14Q9P2M4 693 aa27.76■■■□□ 2.03
TSPAN4-217ENST00000527644 MYO16Q9Y6X6 1858 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 A0A1W2PQH9 124 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 O00370 1275 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 XPO1O14980 1071 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 MTIF2P46199 727 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 CCR3P51677 355 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 PDE4CQ08493 712 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 BST2Q10589 180 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 KLHDC10Q6PID8 442 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 SPEM1Q8N4L4 309 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 ZNF276Q8N554 614 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 P2RY13Q9BPV8 354 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 NMUR1Q9HB89 426 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 SH3BP1Q9Y3L3 701 aa27.75■■■□□ 2.03
TSPAN4-217ENST00000527644 RNF225M0QZC1 329 aaPredicted RBP27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 TBX18O95935 607 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 RARGP13631 454 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 GALK1P51570 392 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 GAS6Q14393 721 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 PPP2R5DQ14738 602 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 FSTL4Q6MZW2 842 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 ZC3H14Q6PJT7 736 aaKnown RBP27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 LCLAT1Q6UWP7 414 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 SCD5Q86SK9 330 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 TADA2BQ86TJ2 420 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 RBBP8NLQ8NC74 664 aaPredicted RBP27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 OTUB2Q96DC9 234 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 FAM81BQ96LP2 452 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 KREMEN1Q96MU8 473 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 UBE2TQ9NPD8 197 aaPredicted RBP27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 CLIC5Q9NZA1 410 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 NAGPAQ9UK23 515 aa27.74■■■□□ 2.03
TSPAN4-217ENST00000527644 ZFHX2Q9C0A1 2572 aaPredicted RBP27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 RALAP11233 206 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 DRD1P21728 446 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 STILQ15468 1287 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 CNGA2Q16280 664 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 GBP6Q6ZN66 633 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 ENOSF1Q7L5Y1 443 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 ARHGAP18Q8N392 663 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 UBA3Q8TBC4 463 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 TFAP2BQ92481 460 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 CDK5RAP1Q96SZ6 601 aaKnown RBP27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 CRACR2AQ9BSW2 395 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 KLF16Q9BXK1 252 aaPredicted RBP27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 CNTN6Q9UQ52 1028 aa27.73■■■□□ 2.03
TSPAN4-217ENST00000527644 GTPBP10A4D1E9 387 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 SETSIPP0DME0 302 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 PLA2G4AP47712 749 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 CXCL12P48061 93 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 TKTL1P51854 596 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 ZNF132P52740 706 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 DHCR24Q15392 516 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 PKDCCQ504Y2 493 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 TRIM65Q6PJ69 517 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 Q6ZS52 159 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 RBM43Q6ZSC3 357 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 CD101Q93033 1021 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 NKD2Q969F2 451 aaPredicted RBP27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 SEMA4AQ9H3S1 761 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 LRRC4Q9HBW1 653 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 FBRSL1Q9HCM7 1045 aaKnown RBP27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 DNMT3LQ9UJW3 386 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 MYO15AQ9UKN7 3530 aa27.72■■■□□ 2.03
TSPAN4-217ENST00000527644 TULP2O00295 520 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 SCAMP3O14828 347 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 CYP17A1P05093 508 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 GOLGA8FQ08AF8 430 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 GOLGA8DPQ0D2H9 430 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 MAN2A1Q16706 1144 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 EXOC3L4Q17RC7 722 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 C10orf120Q5SQS8 335 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 PM20D1Q6GTS8 502 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 KCTD13Q8WZ19 329 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 FAM126AQ9BYI3 521 aaPredicted RBP27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 R4GN57 208 aa27.71■■■□□ 2.03
TSPAN4-217ENST00000527644 ZBED1O96006 694 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 SLC9A1P19634 815 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 MFAP3P55082 362 aa27.7■■■□□ 2.02
TSPAN4-217ENST00000527644 FBXO43Q4G163 708 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms