RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-208	ENST00000527265	ANKRD1	Q15327	319 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TMEM266	Q2M3C6	531 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SLC5A9	Q2M3M2	681 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	BTBD16	Q32M84	506 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	LSM12	Q3MHD2	195 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TTC31	Q49AM3	519 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DUSP28	Q4G0W2	176 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	C1orf141	Q5JVX7	400 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GJC2	Q5T442	439 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	LRCH2	Q5VUJ6	765 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	USP17L6P	Q6QN14	398 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	IL27RA	Q6UWB1	636 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ABHD15	Q6UXT9	468 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RAB11FIP2	Q7L804	512 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CATSPER4	Q7RTX7	472 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	UBE2Q1	Q7Z7E8	422 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	LCA5	Q86VQ0	697 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CCDC28A	Q8IWP9	274 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DIS3L2	Q8IYB7	885 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	OR8H3	Q8N146	312 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TTC39C	Q8N584	583 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TEX9	Q8N6V9	391 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PCSK9	Q8NBP7	692 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	OR5AN1	Q8NGI8	311 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265		Q8TCH9	128 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CUL5	Q93034	780 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZNF503	Q96F45	646 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FEM1C	Q96JP0	617 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EYA3	Q99504	573 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TACO1	Q9BSH4	297 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SOX7	Q9BT81	388 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	C2orf40	Q9H1Z8	148 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	OR10A5	Q9H207	317 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EPS8L2	Q9H6S3	715 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	LDAH	Q9H6V9	325 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TRPV4	Q9HBA0	871 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	XAB2	Q9HCS7	855 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SLAMF7	Q9NQ25	335 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	A1CF	Q9NQ94	594 aa	Known RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SEL1L	Q9UBV2	794 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RGS17	Q9UGC6	210 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZFP69B	Q9UJL9	534 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZNF215	Q9UL58	517 aa	Predicted RBP	4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CAMK2A	Q9UQM7	478 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	NAALADL1	Q9UQQ1	740 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DERA	Q9Y315	318 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DTNA	Q9Y4J8	743 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PSAT1	Q9Y617	370 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	FLT1	P17948	1338 aa		4.2	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RB1CC1	Q8TDY2	1594 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265		A0A087WWL8	130 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265		A0A1W2PR48	441 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	VWA3A	A6NCI4	1184 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GOLGA6L6	A8MZA4	724 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	STX16-NPEPL1	H3BU86	382 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	STX16	O14662	325 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	VILL	O15195	856 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PRAMEF4	O60810	478 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	CUTA	O60888	179 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GPR32	O75388	356 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	RASSF9	O75901	435 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	IL18BP	O95998	194 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TUBB4A	P04350	444 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	HSPA1A	P0DMV8	641 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	HSPA1B	P0DMV9	641 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SCG2	P13521	617 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	DDC	P20711	480 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KLRK1	P26718	216 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ACVR2A	P27037	513 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	APEX1	P27695	318 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KIF5B	P33176	963 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PSMC2	P35998	433 aa	Known RBP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GGT5	P36269	586 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	SREBF1	P36956	1147 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PHKA1	P46020	1223 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PDE6C	P51160	858 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MLLT6	P55198	1093 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PER3	P56645	1201 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	STK4	Q13043	487 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MPP3	Q13368	585 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TBCC	Q15814	346 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	MMEL1	Q495T6	779 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PRAMEF14	Q5SWL7	426 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TTC22	Q5TAA0	569 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	GPR139	Q6DWJ6	353 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ATF7IP	Q6VMQ6	1270 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	BMP8A	Q7Z5Y6	402 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	EPHX4	Q8IUS5	362 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	KBTBD2	Q8IY47	623 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	YAF2	Q8IY57	180 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	PQLC1	Q8N2U9	271 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	STPG3	Q8N7X2	389 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	WDR48	Q8TAF3	677 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	ZFPM2	Q8WW38	1151 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	NEU4	Q8WWR8	484 aa	Predicted RBP	4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	TBC1D5	Q92609	795 aa		4.19	□□□□□ -1.74
CLNS1A-208	ENST00000527265	USP6NL	Q92738	828 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms