RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 SH3BP1Q9Y3L3 701 aa13.84□□□□□ -0.19
CLNS1A-207ENST00000527133 COCHO43405 550 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 NDUFS2O75306 463 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 GAP43P17677 238 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 USP49Q70CQ1 688 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 TMEM25Q86YD3 366 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 BBS7Q8IWZ6 715 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 CHPFQ8IZ52 775 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 FBXO32Q969P5 355 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 OTUB2Q96DC9 234 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 LRIG1Q96JA1 1093 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 ZFRQ96KR1 1074 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 ACOX2Q99424 681 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 MRPL45Q9BRJ2 306 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 ZNF518BQ9C0D4 1074 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 SLC6A17Q9H1V8 727 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 SNX25Q9H3E2 840 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 FAM124BQ9H5Z6 455 aaPredicted RBP13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 CD93Q9NPY3 652 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 NME7Q9Y5B8 376 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 PCDHB13Q9Y5F0 798 aa13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 HELZ2Q9BYK8 2649 aaKnown RBP13.83□□□□□ -0.2
CLNS1A-207ENST00000527133 CLDN5O00501 218 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 IRF1P10914 325 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 GNSP15586 552 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 MAOBP27338 520 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 YWHAQP27348 245 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 GRIK2Q13002 908 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 DUOXA2Q1HG44 320 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 SYCP2LQ5T4T6 812 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 SDE2Q6IQ49 451 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 SLCO6A1Q86UG4 719 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 GPD1LQ8N335 351 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 PDZD8Q8NEN9 1154 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 OR6B3Q8NGW1 331 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 DNAJC19Q96DA6 116 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 ZNF419Q96HQ0 510 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 EPSTI1Q96J88 318 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 BBC3Q96PG8 261 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 KIF2CQ99661 725 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 FGFBP2Q9BYJ0 223 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 ELOVL4Q9GZR5 314 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 DPEP3Q9H4B8 488 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 CD248Q9HCU0 757 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 SUSD2Q9UGT4 822 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 CHORDC1Q9UHD1 332 aaPredicted RBP13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 PLXNB3Q9ULL4 1909 aa13.82□□□□□ -0.2
CLNS1A-207ENST00000527133 EIF4E1BA6NMX2 242 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 ZIC2O95409 532 aaPredicted RBP13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 BMP15O95972 392 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 IDEP14735 1019 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 PTPN1P18031 435 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 GJB2P29033 226 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 HECTD3Q5T447 861 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 KIAA1324Q6UXG2 1013 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 TOGARAM2Q6ZUX3 1019 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 SETD7Q8WTS6 366 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 WBP2Q969T9 261 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 B3GNT5Q9BYG0 378 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 CCSER2Q9H7U1 834 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 OLFML3Q9NRN5 406 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 PCOLCE2Q9UKZ9 415 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 STARD13Q9Y3M8 1113 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 RAD54BQ9Y620 910 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 KALRNO60229 2985 aa13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 ASH1LQ9NR48 2969 aaKnown RBP13.81□□□□□ -0.2
CLNS1A-207ENST00000527133 ZNF233A6NK53 670 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 NEDD8-MDP1E9PL57 170 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 CBFA2T3O75081 653 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 PRPF6O94906 941 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 ALCAMQ13740 583 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 WDR45BQ5MNZ6 344 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 SV2BQ7L1I2 683 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 SCFD1Q8WVM8 642 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 OVCA2Q8WZ82 227 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 FOXJ1Q92949 421 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 MRGPRX1Q96LB2 322 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 ZDHHC5Q9C0B5 715 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 NACA2Q9H009 215 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 CACNA2D2Q9NY47 1150 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 CCDC39Q9UFE4 941 aa13.8□□□□□ -0.2
CLNS1A-207ENST00000527133 MEI4A8MW99 385 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 PRRT4C9JH25 899 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 TACC1O75410 805 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 TNNC1P63316 161 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 SURF1Q15526 300 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 RRAGBQ5VZM2 374 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms