RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 MYL6P60660 151 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 SNRPFP62306 86 aaKnown RBP17.09■□□□□ 0.33
PTPRU-210ENST00000527027 SEMA3BQ13214 749 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 DUOXA1Q1HG43 343 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 SLC36A4Q6YBV0 504 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 TMEM25Q86YD3 366 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 SCAMP5Q8TAC9 235 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 SYAP1Q96A49 352 aaPredicted RBP17.09■□□□□ 0.33
PTPRU-210ENST00000527027 XYLT2Q9H1B5 865 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 CUEDC2Q9H467 287 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 SPHK2Q9NRA0 654 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 COMMD8Q9NX08 183 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 IL37Q9NZH6 218 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 NEUROG3Q9Y4Z2 214 aa17.09■□□□□ 0.33
PTPRU-210ENST00000527027 CACNA1EQ15878 2313 aa17.08■□□□□ 0.33
PTPRU-210ENST00000527027 PCNX2A6NKB5 2137 aa17.08■□□□□ 0.33
PTPRU-210ENST00000527027 ATP8B3O60423 1300 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 ATXN2Q99700 1313 aaKnown RBP17.08■□□□□ 0.32
PTPRU-210ENST00000527027 GABRG2P18507 467 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 TUBP50607 506 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 CYP2J2P51589 502 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 ATXN3P54252 364 aaPredicted RBP17.08■□□□□ 0.32
PTPRU-210ENST00000527027 ASIC1P78348 528 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 RPL6Q02878 288 aaKnown RBP17.08■□□□□ 0.32
PTPRU-210ENST00000527027 GFPT1Q06210 699 aaPredicted RBP17.08■□□□□ 0.32
PTPRU-210ENST00000527027 E2F4Q16254 413 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 ANO4Q32M45 955 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 FAM26FQ5R3K3 315 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 KIAA1211LQ6NV74 962 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 CNNM4Q6P4Q7 775 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 PAQR9Q6ZVX9 377 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 BBS7Q8IWZ6 715 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 DEFB119Q8N690 84 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 GZF1Q9H116 711 aaPredicted RBP17.08■□□□□ 0.32
PTPRU-210ENST00000527027 CCSER2Q9H7U1 834 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 PTPRDP23468 1912 aa17.08■□□□□ 0.32
PTPRU-210ENST00000527027 PKD1L2Q7Z442 2459 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 FAM92AA1XBS5 289 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 SRRM3A6NNA2 597 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 HYAL3O43820 417 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 PHACTR2O75167 634 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 SERPINF2P08697 491 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 ZDHHC11BP0C7U3 371 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 HOXB2P14652 356 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 NTSR1P30989 418 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 NASPP49321 788 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 SLC5A3P53794 718 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 CDH8P55286 799 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 ZNF33AQ06730 810 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 RABEPKQ7Z6M1 372 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 FAM35AQ86V20 835 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 HDDC3Q8N4P3 179 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 WBP2Q969T9 261 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 MED10Q9BTT4 135 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 GTPBP2Q9BX10 602 aaKnown RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 ZSCAN16Q9H4T2 348 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 VRTNQ9H8Y1 702 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 CAPN10Q9HC96 672 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 DMAP1Q9NPF5 467 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-210ENST00000527027 HCN2Q9UL51 889 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 MSRB2Q9Y3D2 182 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 STARD13Q9Y3M8 1113 aa17.07■□□□□ 0.32
PTPRU-210ENST00000527027 MYOFQ9NZM1 2061 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 BAHCC1Q9P281 2608 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 SPAARA0A1B0GVQ0 90 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-210ENST00000527027 RDXP35241 583 aaKnown RBP17.06■□□□□ 0.32
PTPRU-210ENST00000527027 WASP42768 502 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 STK38Q15208 465 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 NELFCDQ8IXH7 590 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 IQUBQ8NA54 791 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 SCFD1Q8WVM8 642 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 TNIP3Q96KP6 325 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 C7orf25Q9BPX7 421 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 NACA2Q9H009 215 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 FSCN3Q9NQT6 498 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 GMIPQ9P107 970 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 CGNQ9P2M7 1197 aaKnown RBP17.06■□□□□ 0.32
PTPRU-210ENST00000527027 MTMR6Q9Y217 621 aa17.06■□□□□ 0.32
PTPRU-210ENST00000527027 UBE4BO95155 1302 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 IGHV1OR15-9A0A0B4J2B8 117 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 A0A1W2PQF6 199 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 H0Y626 953 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 TRIM24O15164 1050 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 SPTLC2O15270 562 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 OPHN1O60890 802 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 ZNF217O75362 1048 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 AP1G2O75843 785 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 TRIM16O95361 564 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 IRF1P10914 325 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 SDE2Q6IQ49 451 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 HTR3DQ70Z44 454 aa17.05■□□□□ 0.32
PTPRU-210ENST00000527027 MIB1Q86YT6 1006 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms