RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 R3HDMLQ9H3Y0 253 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 POPDC2Q9HBU9 364 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 MTO1Q9Y2Z2 717 aaKnown RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 UTRNP46939 3433 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 RALGAPA2Q2PPJ7 1873 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 TRIM49D1C9J1S8 452 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 H7C0C1 242 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 GPR25O00155 361 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 ATP5OP48047 213 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 CMPK2Q5EBM0 449 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 TTC39BQ5VTQ0 682 aaPredicted RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 DSTYKQ6XUX3 929 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 TTC7BQ86TV6 843 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 RXFP2Q8WXD0 754 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 RTP4Q96DX8 246 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 RNF157Q96PX1 679 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 SRPK1Q96SB4 655 aaKnown RBP12.14□□□□□ -0.47
LINC01001-201ENST00000526704 RAB6BQ9NRW1 208 aa12.14□□□□□ -0.47
LINC01001-201ENST00000526704 CXorf49A8MYA2 514 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 GSC2O15499 205 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 HMGCRP04035 888 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 CLCN3P51790 818 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 TFDP2Q14188 446 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 CDO1Q16878 200 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 KHDC1Q4VXA5 237 aaKnown RBP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 FAXCQ5TGI0 409 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 WDR78Q5VTH9 848 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 MAP1SQ66K74 1059 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 RINLQ6ZS11 566 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 SLC26A11Q86WA9 606 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 PLD5Q8N7P1 536 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 TRPM4Q8TD43 1214 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 NSL1Q96IY1 281 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 DCLRE1BQ9H816 532 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 PAK5Q9P286 719 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 SOCS7O14512 581 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 COPEO14579 308 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 KLF11O14901 512 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 KCNN4O15554 427 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 STAG3L1P0CL83 205 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 MYL2P10916 166 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 VDRP11473 427 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 IL4RP24394 825 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 RXRBP28702 533 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 PRKG1Q13976 671 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 KRT72Q14CN4 511 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 DPH6Q7L8W6 267 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 PLPPR4Q7Z2D5 763 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 CAND1Q86VP6 1230 aaKnown RBP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 PQLC3Q8N755 202 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 PPM1NQ8N819 430 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
LINC01001-201ENST00000526704 SPATC1LQ9H0A9 340 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 ARHGEF4Q9NR80 690 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 SMYD2Q9NRG4 433 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 GPATCH2LQ9NWQ4 482 aa12.13□□□□□ -0.47
LINC01001-201ENST00000526704 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 GRAP2O75791 330 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 NEBLO76041 1014 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 PDGFRAP16234 1089 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ATP6V1C1P21283 382 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 CCNFP41002 786 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 MRPS5P82675 430 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 KRT81Q14533 505 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 OR6B2Q6IFH4 312 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 FGD4Q96M96 766 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 HEXIM2Q96MH2 286 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 TUBB6Q9BUF5 446 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 MECRQ9BV79 373 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 CYP3A43Q9HB55 503 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 MYO18AQ92614 2054 aaKnown RBP12.12□□□□□ -0.47
LINC01001-201ENST00000526704 FAM237BA0A1B0GVD1 139 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 FZD9O00144 591 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 FCHO1O14526 889 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 UGT1A9O60656 530 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 PFKMP08237 780 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 NEFHP12036 1026 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 PRKCHP24723 683 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 RBL1P28749 1068 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ATICP31939 592 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ZBTB16Q05516 673 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 INCA1Q0VD86 236 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 FAM91A1Q658Y4 838 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
LINC01001-201ENST00000526704 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms