RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 LILRB5O75023 590 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 ATG13O75143 517 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 HOXA6P31267 233 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 STX17P56962 302 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 CAMK4Q16566 473 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 FSTL4Q6MZW2 842 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 TADA2BQ86TJ2 420 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 ADGRG2Q8IZP9 1017 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 UBR7Q8N806 425 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 MLKLQ8NB16 471 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 CD101Q93033 1021 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 ZFRQ96KR1 1074 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 NACA2Q9H009 215 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 LINC00597Q9H2U6 94 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 CCSER2Q9H7U1 834 aa19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.45■□□□□ 0.7
TSPAN4-216ENST00000526055 SPTBN4Q9H254 2564 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 GALK1P51570 392 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 KCNH2Q12809 1159 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 Q6ZS52 159 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 GPRIN1Q7Z2K8 1008 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 LMO3Q8TAP4 145 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 CDK5RAP1Q96SZ6 601 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 CLSTN2Q9H4D0 955 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 SH3BP1Q9Y3L3 701 aa19.44■□□□□ 0.7
TSPAN4-216ENST00000526055 FRYLO94915 3013 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 CHURC1-FNTBB4DL54 471 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 ADH1CP00326 375 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 AFPP02771 609 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 PAEPP09466 180 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 VDRP11473 427 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 ATP5C1P36542 298 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 EIF2DP41214 584 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 BCAT1P54687 386 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 SATB1Q01826 763 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 GCNT1Q02742 428 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 GOLGA8FQ08AF8 430 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 GOLGA8DPQ0D2H9 430 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 SGO2Q562F6 1265 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 RAB41Q5JT25 222 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 ARHGAP18Q8N392 663 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 CLIC5Q9NZA1 410 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 HESX1Q9UBX0 185 aa19.43■□□□□ 0.7
TSPAN4-216ENST00000526055 CYP26A1O43174 497 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 CYP17A1P05093 508 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 LRMPQ12912 555 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 DHCR24Q15392 516 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 TSSK4Q6SA08 328 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 PPM1KQ8N3J5 372 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 EHBP1Q8NDI1 1231 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 JAKMIP2Q96AA8 810 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 EPC1Q9H2F5 836 aa19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.42■□□□□ 0.7
TSPAN4-216ENST00000526055 K7ESF4 209 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 XPO1O14980 1071 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 EGFP01133 1207 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 RALAP11233 206 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 CNR2P34972 360 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 BST2Q10589 180 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 STILQ15468 1287 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 SMYD5Q6GMV2 418 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 HTR3DQ70Z44 454 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 PIGZQ86VD9 579 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 SUMF1Q8NBK3 374 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 FAM81BQ96LP2 452 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 KLF16Q9BXK1 252 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 FBRSL1Q9HCM7 1045 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 DNMT3LQ9UJW3 386 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 TSPAN16Q9UKR8 245 aa19.41■□□□□ 0.7
TSPAN4-216ENST00000526055 CCDC163A0A0D9SF12 145 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 A0A1W2PQH9 124 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 SETSIPP0DME0 302 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 RARGP13631 454 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 CD19P15391 556 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 OPRD1P41143 372 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 PLA2G4AP47712 749 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 PGFP49763 221 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 GOLGA7BQ2TAP0 167 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 GAB4Q2WGN9 574 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 PREPLQ4J6C6 727 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 PM20D1Q6GTS8 502 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 RHBDF2Q6PJF5 856 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 TMEM270Q6UE05 265 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 LCLAT1Q6UWP7 414 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 TTC30AQ86WT1 665 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 ACDQ96AP0 544 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 NUP62CLQ9H1M0 184 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 NMUR1Q9HB89 426 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 OSER1Q9NX31 292 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 DACH1Q9UI36 760 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 NAGPAQ9UK23 515 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 LSM7Q9UK45 103 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 PCDHB4Q9Y5E5 795 aa19.4■□□□□ 0.7
TSPAN4-216ENST00000526055 ZNF292O60281 2723 aa19.39■□□□□ 0.7
TSPAN4-216ENST00000526055 O00370 1275 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 HOXC11O43248 304 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 RNF40O75150 1001 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 ADH5P11766 374 aa19.39■□□□□ 0.69
TSPAN4-216ENST00000526055 PRKCSHP14314 528 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms