RNA–Protein interactions for RNA: ENST00000526001.1

CSF1-208, Transcript of colony stimulating factor 1, human

TSL 4

Gene CSF1, Length 573 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSF1-208	ENST00000526001	CISH	Q9NSE2	258 aa		13.19	□□□□□ -0.3
CSF1-208	ENST00000526001	USP18	Q9UMW8	372 aa		13.19	□□□□□ -0.3
CSF1-208	ENST00000526001	SCML2	Q9UQR0	700 aa		13.19	□□□□□ -0.3
CSF1-208	ENST00000526001	SH3BP1	Q9Y3L3	701 aa		13.19	□□□□□ -0.3
CSF1-208	ENST00000526001	OTOGL	Q3ZCN5	2332 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001		A0A1W2PQH9	124 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	MDM4	O15151	490 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	SLC16A3	O15427	465 aa	Known RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	STX10	O60499	249 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	GADD45B	O75293	160 aa	Predicted RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	RET	P07949	1114 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	ADH5	P11766	374 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	RAD23B	P54727	409 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	DMC1	Q14565	340 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	C2orf27A	Q580R0	203 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	LY6G5C	Q5SRR4	150 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	SYT13	Q7L8C5	426 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	SLC4A11	Q8NBS3	891 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	USP33	Q8TEY7	942 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	GAB3	Q8WWW8	586 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	HEXIM2	Q96MH2	286 aa	Known RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	KLF16	Q9BXK1	252 aa	Predicted RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	NACA2	Q9H009	215 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	TLR8	Q9NR97	1041 aa	Known RBP	13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	TBC1D14	Q9P2M4	693 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	NUDT5	Q9UKK9	219 aa		13.18	□□□□□ -0.3
CSF1-208	ENST00000526001	GREM1	O60565	184 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	RPP40	O75818	363 aa	Known RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	ADH1C	P00326	375 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	CHRM1	P11229	460 aa	Predicted RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	TRIM21	P19474	475 aa	Known RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	BMP6	P22004	513 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	KIF11	P52732	1056 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	LRRC63	Q05C16	580 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	KDSR	Q06136	332 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	SCD5	Q86SK9	330 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	KBTBD6	Q86V97	674 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	CCDC33	Q8N5R6	958 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	CAMKK1	Q8N5S9	505 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	GPR161	Q8N6U8	529 aa	Known RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	NAT16	Q8N8M0	369 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	ACD	Q96AP0	544 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	TMEM176A	Q96HP8	235 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	DUSP9	Q99956	384 aa	Known RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	DUSP16	Q9BY84	665 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	PNPLA8	Q9NP80	782 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	ZDHHC4	Q9NPG8	344 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	CYLD	Q9NQC7	956 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	HOOK1	Q9UJC3	728 aa	Known RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	COQ4	Q9Y3A0	265 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	GVINP1	Q7Z2Y8	2422 aa		13.17	□□□□□ -0.3
CSF1-208	ENST00000526001	ATG2B	Q96BY7	2078 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	CCDC163	A0A0D9SF12	145 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	AXIN1	O15169	862 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	APBB3	O95704	486 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	CCDC192	P0DO97	292 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	RARG	P13631	454 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	ATP5C1	P36542	298 aa	Known RBP	13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	GAD2	Q05329	585 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	LRMP	Q12912	555 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	EMC10	Q5UCC4	262 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	TMEM25	Q86YD3	366 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	PHTF2	Q8N3S3	785 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	SLC35C1	Q96A29	364 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	FAXDC2	Q96IV6	333 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	PNKP	Q96T60	521 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	SPHK2	Q9NRA0	654 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	DLL3	Q9NYJ7	618 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	USP3	Q9Y6I4	520 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	KIAA1549L	Q6ZVL6	1849 aa		13.16	□□□□□ -0.3
CSF1-208	ENST00000526001	EP300	Q09472	2414 aa	Predicted RBP	13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	MYO16	Q9Y6X6	1858 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	PPP1R3G	B7ZBB8	358 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	TULP2	O00295	520 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	BIN1	O00499	593 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	PSMA7	O14818	248 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	DCLK1	O15075	740 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	TRIM24	O15164	1050 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	HOXC11	O43248	304 aa	Predicted RBP	13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	KAT7	O95251	611 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	APOD	P05090	189 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	TIE1	P35590	1138 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	EIF2D	P41214	584 aa	Known RBP	13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	CUL2	Q13617	745 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	CCDC6	Q16204	474 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	ARHGAP17	Q68EM7	881 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	KLHL10	Q6JEL2	608 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	TTI2	Q6NXR4	508 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	HTR3D	Q70Z44	454 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	ERMP1	Q7Z2K6	904 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	DGLUCY	Q7Z3D6	616 aa		13.15	□□□□□ -0.3
CSF1-208	ENST00000526001	CCDC186	Q7Z3E2	898 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms