RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KIF20AO95235 890 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 OAS1P00973 400 aaKnown RBP6.98□□□□□ -1.29
CD44-221ENST00000526000 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
CD44-221ENST00000526000 CCDC130P13994 396 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 HOXB2P14652 356 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 TCF3P15923 654 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 PDE6CP51160 858 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 ASIC1P78348 528 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 BIRC3Q13489 604 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 BYSLQ13895 437 aaKnown RBP6.98□□□□□ -1.29
CD44-221ENST00000526000 DUOXA1Q1HG43 343 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 CCDC157Q569K6 752 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 HECTD3Q5T447 861 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 SLC23A3Q6PIS1 610 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 KIAA1324Q6UXG2 1013 aaKnown RBP6.98□□□□□ -1.29
CD44-221ENST00000526000 TOGARAM2Q6ZUX3 1019 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 PAQR9Q6ZVX9 377 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 LIMS2Q7Z4I7 341 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 SLC41A1Q8IVJ1 513 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 CHPFQ8IZ52 775 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 MINDY1Q8N5J2 469 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 DHX58Q96C10 678 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 TTLL2Q9BWV7 592 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 MIR1-1HGQ9H1L0 117 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 SPHK2Q9NRA0 654 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 OLFML3Q9NRN5 406 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 DNAJC17Q9NVM6 304 aaKnown RBP6.98□□□□□ -1.29
CD44-221ENST00000526000 CACNA2D2Q9NY47 1150 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 CALCOCO1Q9P1Z2 691 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 TBC1D14Q9P2M4 693 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 EVLQ9UI08 416 aaPredicted RBP6.98□□□□□ -1.29
CD44-221ENST00000526000 PCDHB9Q9Y5E1 797 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 PCNX2A6NKB5 2137 aa6.98□□□□□ -1.29
CD44-221ENST00000526000 GREB1Q4ZG55 1949 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 A0A0A0MRY4 1105 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 IGHV1OR15-9A0A0B4J2B8 117 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 E2F8A0AVK6 867 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 PRRT4C9JH25 899 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 NEDD8-MDP1E9PL57 170 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 TGFB1I1O43294 461 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 AP5Z1O43299 807 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 NDUFS2O75306 463 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 TACC1O75410 805 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 AP1G2O75843 785 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 HMBSP08397 361 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 CD59P13987 128 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SYT1P21579 422 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 ADORA2BP29275 332 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 NTSR1P30989 418 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 AFMP43652 599 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 PPP3CCP48454 512 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 MAP3K7CLP57077 242 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 NOP14P78316 857 aaKnown RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 NUCB2P80303 420 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 CYP24A1Q07973 514 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SEMA3BQ13214 749 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SLC39A14Q15043 492 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 STK38Q15208 465 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SNRNP35Q16560 246 aaKnown RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 PLEKHG6Q3KR16 790 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 GRAMD4Q6IC98 578 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SDE2Q6IQ49 451 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 PIP4P1Q86T03 277 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 CACUL1Q86Y37 369 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 WDR49Q8IV35 697 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 PHTF2Q8N3S3 785 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 C12orf29Q8N999 325 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 B3GALNT2Q8NCR0 500 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 PLEKHO2Q8TD55 490 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 IPO4Q8TEX9 1081 aaKnown RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 HNRNPLLQ8WVV9 542 aaKnown RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 ZFRQ96KR1 1074 aaKnown RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 HSPA12BQ96MM6 686 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 CGRRF1Q99675 332 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SMOQ99835 787 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 BBS2Q9BXC9 721 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 SDCBP2Q9H190 292 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 ZSCAN16Q9H4T2 348 aaPredicted RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 SLC39A2Q9NP94 309 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 AGPAT3Q9NRZ7 376 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 FAM49BQ9NUQ9 324 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 EHD2Q9NZN4 543 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 MSRB2Q9Y3D2 182 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 MYO18AQ92614 2054 aaKnown RBP6.97□□□□□ -1.29
CD44-221ENST00000526000 EML5Q05BV3 1969 aa6.97□□□□□ -1.29
CD44-221ENST00000526000 NUP210Q8TEM1 1887 aaPredicted RBP6.96□□□□□ -1.29
CD44-221ENST00000526000 ASXL3Q9C0F0 2248 aa6.96□□□□□ -1.29
CD44-221ENST00000526000 TCHHQ07283 1943 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 A0A1W2PQF6 199 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 FRMD3A2A2Y4 597 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 ARHGAP33O14559 1287 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 KCNK3O14649 394 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 STX6O43752 255 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 EXOC3O60645 756 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 RTN3O95197 1032 aaPredicted RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 ZIC2O95409 532 aaPredicted RBP6.96□□□□□ -1.3
CD44-221ENST00000526000 OLFM2O95897 454 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 SERPINF2P08697 491 aa6.96□□□□□ -1.3
CD44-221ENST00000526000 TYRP14679 529 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms