RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 TCRBV21S2A2A0A5A6 115 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 FAM92AA1XBS5 289 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 C1QTNF9BB2RNN3 333 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 CUTAO60888 179 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 C1QTNF9P0C862 333 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 HOXD12P35452 270 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 PTGER3P43115 390 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 AP3M2P53677 418 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 CDH8P55286 799 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 EHHADHQ08426 723 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 SLC23A3Q6PIS1 610 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 PAQR9Q6ZVX9 377 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 ETFBKMTQ8IXQ9 262 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 C12orf56Q8IXR9 622 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 ZNF513Q8N8E2 541 aaPredicted RBP11.33□□□□□ -0.6
VPS26B-203ENST00000525918 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 SMARCD1Q96GM5 515 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
VPS26B-203ENST00000525918 MED10Q9BTT4 135 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 GZF1Q9H116 711 aaPredicted RBP11.33□□□□□ -0.6
VPS26B-203ENST00000525918 SLC32A1Q9H598 525 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 MAGEF1Q9HAY2 307 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
VPS26B-203ENST00000525918 ZDHHC4Q9NPG8 344 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 SPHK2Q9NRA0 654 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 TFIP11Q9UBB9 837 aaKnown RBP11.33□□□□□ -0.6
VPS26B-203ENST00000525918 MBD1Q9UIS9 605 aaPredicted RBP11.33□□□□□ -0.6
VPS26B-203ENST00000525918 ASPMQ8IZT6 3477 aa11.33□□□□□ -0.6
VPS26B-203ENST00000525918 GON4LQ3T8J9 2241 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 CEP295Q9C0D2 2601 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 PVALEFA0A1B0GWK0 134 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 HOXC11O43248 304 aaPredicted RBP11.32□□□□□ -0.6
VPS26B-203ENST00000525918 AP5Z1O43299 807 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 EXOC3O60645 756 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 TULP3O75386 442 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 YEATS4O95619 227 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ZDHHC11BP0C7U3 371 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ENGP17813 658 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 SLC5A3P53794 718 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 CLDN10P78369 228 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 BIRC3Q13489 604 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 KNOP1Q1ED39 458 aaKnown RBP11.32□□□□□ -0.6
VPS26B-203ENST00000525918 BMT2Q1RMZ1 405 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ANO4Q32M45 955 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ZNF699Q32M78 642 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 PEAR1Q5VY43 1037 aaPredicted RBP11.32□□□□□ -0.6
VPS26B-203ENST00000525918 LYSMD4Q5XG99 296 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 SHC4Q6S5L8 630 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ARMCX6Q7L4S7 300 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 FAM35AQ86V20 835 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 TERB1Q8NA31 727 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
VPS26B-203ENST00000525918 DEFB124Q8NES8 71 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 CEP76Q8TAP6 659 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 NACA2Q9H009 215 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 CCSER2Q9H7U1 834 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 SLC39A2Q9NP94 309 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 ZMIZ1Q9ULJ6 1067 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 STARD13Q9Y3M8 1113 aa11.32□□□□□ -0.6
VPS26B-203ENST00000525918 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
VPS26B-203ENST00000525918 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
VPS26B-203ENST00000525918 AP1G2O75843 785 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 CLSTN1O94985 981 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
VPS26B-203ENST00000525918 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 GABRG2P18507 467 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 SPINK2P20155 84 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 ITPKAP23677 461 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 NTSR1P30989 418 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 MAPK8P45983 427 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 CASP4P49662 377 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
VPS26B-203ENST00000525918 DUOXA1Q1HG43 343 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 SLC36A4Q6YBV0 504 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 HTR3DQ70Z44 454 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 GOLGA5Q8TBA6 731 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 PARD3BQ8TEW8 1205 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 SCNM1Q9BWG6 230 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 BLZF1Q9H2G9 400 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 FBXO44Q9H4M3 255 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 GMIPQ9P107 970 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 SLC6A14Q9UN76 642 aa11.31□□□□□ -0.6
VPS26B-203ENST00000525918 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 TLR5O60602 858 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 ZNF217O75362 1048 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 TOP3BO95985 862 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms