RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 ZNF687Q8N1G0 1237 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 ANKRD52Q8NB46 1076 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 FAM3CQ92520 227 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 CLDN23Q96B33 292 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 KREMEN1Q96MU8 473 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 CNTNAP3BQ96NU0 1288 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 NELL2Q99435 816 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 CNTNAP3Q9BZ76 1288 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 PARD6AQ9NPB6 346 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 PRMT8Q9NR22 394 aaPredicted RBP13.46□□□□□ -0.25
CLP1-202ENST00000525602 CHORDC1Q9UHD1 332 aaPredicted RBP13.46□□□□□ -0.25
CLP1-202ENST00000525602 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 SCML2Q9UQR0 700 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 PCDHGA2Q9Y5H1 932 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 CPQQ9Y646 472 aa13.46□□□□□ -0.25
CLP1-202ENST00000525602 FRYQ5TBA9 3013 aa13.46□□□□□ -0.26
CLP1-202ENST00000525602 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 LEFTY2O00292 366 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 CYP26A1O43174 497 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 COCHO43405 550 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 KRT37O76014 449 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 PAEPP09466 180 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 MBL2P11226 248 aaPredicted RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 VDRP11473 427 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ARSAP15289 507 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 PGFP49763 221 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 KIF11P52732 1056 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ZNF132P52740 706 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 BCAT1P54687 386 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 PDGFRLQ15198 375 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 MAN2A1Q16706 1144 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 C1orf228Q6PIY5 440 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 ZBTB44Q8NCP5 570 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 OSCP1Q8WVF1 389 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ATRIPQ8WXE1 791 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 EPC1Q9H2F5 836 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 EBF3Q9H4W6 596 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ZSCAN32Q9NX65 697 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 WNT6Q9Y6F9 365 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 GTPBP10A4D1E9 387 aaKnown RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 OTOL1A6NHN0 477 aaPredicted RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 RNF225M0QZC1 329 aaPredicted RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 O00370 1275 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 TLR5O60602 858 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 LILRB5O75023 590 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 HOXC13P31276 330 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 MAGEA9P43362 315 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 IFNAR2P48551 515 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ATXN1P54253 815 aaKnown RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 SLC8A3P57103 927 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 RUNX3Q13761 415 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 HSP90AA4PQ58FG1 418 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 RAB41Q5JT25 222 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 TRIM65Q6PJ69 517 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 TXNDC11Q6PKC3 985 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 GBP6Q6ZN66 633 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 PIGZQ86VD9 579 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 TFAP2BQ92481 460 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 NELL1Q92832 810 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 UBXN6Q9BZV1 441 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 UBE2TQ9NPD8 197 aaPredicted RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 TLR8Q9NR97 1041 aaKnown RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
CLP1-202ENST00000525602 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 KIAA1257Q9ULG3 409 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 USP3Q9Y6I4 520 aa13.45□□□□□ -0.26
CLP1-202ENST00000525602 RALGAPA1Q6GYQ0 2036 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 A0A1W2PQH9 124 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 DCDC2BA2VCK2 349 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 TULP2O00295 520 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 XPO1O14980 1071 aaKnown RBP13.44□□□□□ -0.26
CLP1-202ENST00000525602 NCAM2O15394 837 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 CALCAP01258 141 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 TDGF1P13385 188 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
CLP1-202ENST00000525602 SLC9A1P19634 815 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 TGM1P22735 817 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 BRD2P25440 801 aaKnown RBP13.44□□□□□ -0.26
CLP1-202ENST00000525602 RPS9P46781 194 aaKnown RBP13.44□□□□□ -0.26
CLP1-202ENST00000525602 APBA1Q02410 837 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 PDE4CQ08493 712 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 BST2Q10589 180 aaKnown RBP13.44□□□□□ -0.26
CLP1-202ENST00000525602 KCNJ12Q14500 433 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 EXOC3L4Q17RC7 722 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 EML3Q32P44 896 aa13.44□□□□□ -0.26
CLP1-202ENST00000525602 PKDCCQ504Y2 493 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms