RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 RAB11FIP2Q7L804 512 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 OTOAQ7RTW8 1153 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 KRT28Q7Z3Y7 464 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TMC3Q7Z5M5 1100 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ADGRG6Q86SQ4 1221 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 FAM35AQ86V20 835 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 WDR63Q8IWG1 891 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 SP8Q8IXZ3 490 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 LRRC43Q8N309 656 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 DTWD2Q8NBA8 298 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZNF417Q8TAU3 575 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 BRIX1Q8TDN6 353 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 MR1Q95460 341 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 LRRC59Q96AG4 307 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 SLC22A18Q96BI1 424 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TUBGCP3Q96CW5 907 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CHAMP1Q96JM3 812 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 MRGPRX4Q96LA9 322 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 RBM14Q96PK6 669 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 ABHD1Q96SE0 405 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZNF587Q96SQ5 575 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 AGAP2Q99490 1192 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 VRK1Q99986 396 aaPredicted RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 MYL10Q9BUA6 226 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 UBE2OQ9C0C9 1292 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 KLHL4Q9C0H6 718 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 SLC25A18Q9H1K4 315 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ST6GALNAC4Q9H4F1 302 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 WDCPQ9H6R7 721 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZNF304Q9HCX3 659 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 IL1RAPL2Q9NP60 686 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CD93Q9NPY3 652 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 PFDN4Q9NQP4 134 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 POLE3Q9NRF9 147 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZDHHC7Q9NXF8 308 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 DDX43Q9NXZ2 648 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 NOP53Q9NZM5 478 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 CRIM1Q9NZV1 1036 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 ZNF212Q9UDV6 495 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 MINPP1Q9UNW1 487 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 AURKCQ9UQB9 309 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 NOSIPQ9Y314 301 aaKnown RBP4.76□□□□□ -1.65
CD44-213ENST00000525209 STARD13Q9Y3M8 1113 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 FPGT-TNNI3KV9GXZ4 949 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 TOPBP1Q92547 1522 aa4.76□□□□□ -1.65
CD44-213ENST00000525209 CFTRP13569 1480 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ATP8B3O60423 1300 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 IGSF1Q8N6C5 1336 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TRBV23OR9-2A0A075B6M9 112 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ST20-MTHFSA0A0A6YYL1 179 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TRAV34A0A0B4J273 112 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 hCG_1809904A0A1W2PP81 198 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 A0A1W2PPE2 198 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 A0A1W2PR64 198 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 URADA6NGE7 173 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 FAM171A2A8MVW0 826 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 GPR89AB7ZAQ6 455 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 STX16-NPEPL1H3BU86 382 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 PIK3R2O00459 728 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 BTN3A1O00481 513 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 STX16O14662 325 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 NKRFO15226 690 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD44-213ENST00000525209 KLK10O43240 276 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 CEP104O60308 925 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 IFNB1P01574 187 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TFRCP02786 760 aaKnown RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 GPR89BP0CG08 455 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 XRCC6P12956 609 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD44-213ENST00000525209 CDC25BP30305 580 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ADRA1BP35368 520 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 BSGP35613 385 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 BCL6P41182 706 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 CASP3P42574 277 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 CTSKP43235 329 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 LMAN1P49257 510 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 EIF4A1P60842 406 aaKnown RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 CDC42EP1Q00587 391 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SLC13A2Q13183 592 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 BMPR2Q13873 1038 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 IRF3Q14653 427 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 INAQ16352 499 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 MEP1BQ16820 701 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 NRN1LQ496H8 165 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 RAB41Q5JT25 222 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 C9orf152Q5JTZ5 239 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 TTC22Q5TAA0 569 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 EEF1DP3Q658K8 133 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ARHGAP11AQ6P4F7 1023 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SUSD1Q6UWL2 747 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 GBP6Q6ZN66 633 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 LINC00696Q6ZRV3 163 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ALYREFQ86V81 257 aaKnown RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 PPP1R3BQ86XI6 285 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 SPATA2LQ8IUW3 424 aaPredicted RBP4.75□□□□□ -1.65
CD44-213ENST00000525209 RHOT1Q8IXI2 618 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 ADGRF2Q8IZF7 708 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 FRMD1Q8N878 549 aa4.75□□□□□ -1.65
CD44-213ENST00000525209 RTL3Q8N8U3 475 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms