RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TLR5O60602 858 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 PAPLNO95428 1278 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 OAS1P00973 400 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 FYNP06241 537 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TPM3P06753 285 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 POU2F2P09086 479 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 ARSAP15289 507 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 FERP16591 822 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TFE3P19532 575 aaPredicted RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TNFAIP3P21580 790 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CD72P21854 359 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 RFX1P22670 979 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 GDI1P31150 447 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 AVPR1AP37288 418 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 EIF4A3P38919 411 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 PLA2G4AP47712 749 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SOX9P48436 509 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 VCPP55072 806 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 DAOAP59103 153 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 BPIFB4P59827 614 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 NOMO3P69849 1222 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CDR2Q01850 454 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 HTR4Q13639 388 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CLEC16AQ2KHT3 1053 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 HECTD3Q5T447 861 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SYPL2Q5VXT5 272 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 BSPRYQ5W0U4 402 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 BTBD8Q5XKL5 378 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 HGSNATQ68CP4 663 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 NAIF1Q69YI7 327 aaPredicted RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SPECC1LQ69YQ0 1117 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SARM1Q6SZW1 724 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CYP26C1Q6V0L0 522 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 RTL10Q7L3V2 364 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 RSRC2Q7L4I2 434 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 MON1AQ86VX9 555 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 ERICH1Q86X53 443 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 DRC7Q8IY82 874 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 ZDHHC14Q8IZN3 488 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC44A3Q8N4M1 653 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 EMC1Q8N766 993 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TMEM35BQ8NCS4 154 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 JOSD2Q8TAC2 188 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SH3RF2Q8TEC5 729 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 KCTD13Q8WZ19 329 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SMARCD2Q92925 531 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 BHMTQ93088 406 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 PPP1R13BQ96KQ4 1090 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM81BQ96LP2 452 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 MYRFLQ96LU7 910 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CHP1Q99653 195 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC4A5Q9BY07 1137 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 LINC00597Q9H2U6 94 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 FBXO44Q9H4M3 255 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 EPHX3Q9H6B9 360 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TLR8Q9NR97 1041 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 METTL5Q9NRN9 209 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TMPRSS4Q9NRS4 437 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SPTLC3Q9NUV7 552 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 IL37Q9NZH6 218 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CFAP97Q9P2B7 532 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 MYO1AQ9UBC5 1043 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 UXTQ9UBK9 157 aaPredicted RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CA14Q9ULX7 337 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 CAPN11Q9UMQ6 739 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 PCDHGC3Q9UN70 934 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 TFR2Q9UP52 801 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 NAALADL1Q9UQQ1 740 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 SCML2Q9UQR0 700 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 LUC7L2Q9Y383 392 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 USP3Q9Y6I4 520 aa4.83□□□□□ -1.64
CHMP4A-202ENST00000524955 ITIH6Q6UXX5 1313 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 A0A087X0T9 212 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 GOLGA6L7A0A1B0GV03 622 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 A0A1W2PQJ5 194 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 SLC12A8A0AV02 714 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM92AA1XBS5 289 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ANTXRLA6NF34 631 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 OTOL1A6NHN0 477 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 AKR1B15C9JRZ8 316 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ANHXE9PGG2 379 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 LEFTY2O00292 366 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 TSPAN3O60637 253 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 MFAP3LO75121 409 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 MOCS2O96007 188 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 PDGFBP01127 241 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 LTFP02788 710 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 CYP1A1P04798 512 aaPredicted RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ZDHHC11BP0C7U3 371 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 FAM228BP0C875 321 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 RALAP11233 206 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 NCAM1P13591 858 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ABCB4P21439 1286 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 GGCXP38435 758 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ATXN1P54253 815 aaKnown RBP4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 ZBED6P86452 979 aa4.82□□□□□ -1.64
CHMP4A-202ENST00000524955 GFPT1Q06210 699 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms