RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PSMC1P62191 440 aaKnown RBP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 TFAMQ00059 246 aaKnown RBP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 CUL3Q13618 768 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 DLGAP5Q15398 846 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 C15orf59Q2T9L4 293 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 CEP128Q6ZU80 1094 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 TMPRSS6Q8IU80 811 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 PLAC1Q9HBJ0 212 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 K7ERI5 159 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 ABLIM1O14639 778 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 STBD1O95210 358 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 LYPLA2O95372 231 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 RPL10AP62906 217 aaKnown RBP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 FKBP1AP62942 108 aaKnown RBP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 EML3Q32P44 896 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 NDUFAF2Q8N183 169 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
CAPN1-202ENST00000524773 PEBP4Q96S96 227 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 CPXM1Q96SM3 734 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 NDNQ99608 321 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 PXMP2Q9NR77 195 aa13.7□□□□□ -0.22
CAPN1-202ENST00000524773 ENTPD3O75355 529 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 TM7SF2O76062 418 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 KRT19P08727 400 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 GARTP22102 1010 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 MIPP30301 263 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ASPHQ12797 758 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 FSTL1Q12841 308 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 KRT72Q14CN4 511 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 NTPCRQ9BSD7 190 aaKnown RBP13.69□□□□□ -0.22
CAPN1-202ENST00000524773 SPATA16Q9BXB7 569 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ARHGAP28Q9P2N2 729 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ZNF70Q9UC06 446 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-202ENST00000524773 HMGXB4Q9UGU5 601 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ANGPTL2Q9UKU9 493 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 DNAH12Q6ZR08 3092 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 BPTFQ12830 3046 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 A0A088AWK7 358 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-202ENST00000524773 KCNN4O15554 427 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ZC3H11AO75152 810 aaKnown RBP eCLIP13.69□□□□□ -0.22
CAPN1-202ENST00000524773 RGS20O76081 388 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 PROCP04070 461 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ACTR3P61158 418 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 MYLK4Q86YV6 388 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-202ENST00000524773 CEP120Q8N960 986 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 IMPG2Q9BZV3 1241 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 ZC3H7BQ9UGR2 993 aaKnown RBP13.69□□□□□ -0.22
CAPN1-202ENST00000524773 TEX264Q9Y6I9 313 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 DOCK5Q9H7D0 1870 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 NFASCO94856 1347 aa13.69□□□□□ -0.22
CAPN1-202ENST00000524773 RFPL1O75677 317 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 ADORA2AP29274 412 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 SERPINB6P35237 376 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 SNRPFP62306 86 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 AP2B1P63010 937 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 ZRSR2Q15696 482 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 SCYL2Q6P3W7 929 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 TRIM72Q6ZMU5 477 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 HPS6Q86YV9 775 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 TMEM35BQ8NCS4 154 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 PPP1R14CQ8TAE6 165 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 DEPTORQ8TB45 409 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 ZNF778Q96MU6 729 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 TAGLN3Q9UI15 199 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 PLLPQ9Y342 182 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 TTLL3Q9Y4R7 772 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 E7ESA3 106 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 MCF2LO15068 1137 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 BUD23O43709 281 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 HNRNPCL1O60812 293 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 ERBB2P04626 1255 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CDH6P55285 790 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 YWHAZP63104 245 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 SLC18A2Q05940 514 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 MSLNQ13421 630 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 GK3PQ14409 553 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 EMC2Q15006 297 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 LIN52Q52LA3 116 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 BSPRYQ5W0U4 402 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 HACE1Q8IYU2 909 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 UBA3Q8TBC4 463 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CCDC106Q9BWC9 280 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 SSU72Q9NP77 194 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CNTNAP2Q9UHC6 1331 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 HMX2A2RU54 273 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CSDE1O75534 798 aaKnown RBP13.68□□□□□ -0.22
CAPN1-202ENST00000524773 CALB1P05937 261 aa13.68□□□□□ -0.22
CAPN1-202ENST00000524773 RAP1GDS1P52306 607 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms