RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 EIF2B5Q13144 721 aaKnown RBP6.74□□□□□ -1.33
SKP1-213ENST00000524288 TUBB3Q13509 450 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 GRM4Q14833 912 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 LY6KQ17RY6 165 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 TIGD2Q4W5G0 525 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 ABLIM2Q6H8Q1 611 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 TANGO2Q6ICL3 276 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 C11orf44Q8N8P7 122 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 OTUD7AQ8TE49 926 aaPredicted RBP6.74□□□□□ -1.33
SKP1-213ENST00000524288 HIST1H2AAQ96QV6 131 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 TMOD4Q9NZQ9 345 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 NEU2Q9Y3R4 380 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 NOX1Q9Y5S8 564 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 DCAF1Q9Y4B6 1507 aa6.74□□□□□ -1.33
SKP1-213ENST00000524288 ABCC9O60706 1549 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 UNC119BA6NIH7 251 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 PPM1DO15297 605 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 ZSCAN9O15535 394 aaPredicted RBP6.73□□□□□ -1.33
SKP1-213ENST00000524288 NDUFA10O95299 355 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 VIPP01282 170 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 GCP02774 474 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 CKMT1AP12532 417 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 PPIFP30405 207 aaKnown RBP6.73□□□□□ -1.33
SKP1-213ENST00000524288 TAP1Q03518 808 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 CUL4BQ13620 913 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 CERCAMQ5T4B2 595 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 ANKRD45Q5TZF3 282 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 JAKMIP3Q5VZ66 844 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 RINT1Q6NUQ1 792 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 CLEC9AQ6UXN8 241 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 MICALCLQ6ZW33 695 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 KRT73Q86Y46 540 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 DNAJC10Q8IXB1 793 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 FTSJ3Q8IY81 847 aaKnown RBP6.73□□□□□ -1.33
SKP1-213ENST00000524288 CSGALNACT1Q8TDX6 532 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 AFG1LQ8WV93 481 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 ATRIPQ8WXE1 791 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 ATG4AQ8WYN0 398 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 EID2BQ96D98 161 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 MYEOVQ96EZ4 313 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 FAM227BQ96M60 508 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 RTKNQ9BST9 563 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 ACTRT3Q9BYD9 372 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 TPSD1Q9BZJ3 242 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 TRIM5Q9C035 493 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 PABPC3Q9H361 631 aaKnown RBP6.73□□□□□ -1.33
SKP1-213ENST00000524288 AKIP1Q9NQ31 210 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 FSCN3Q9NQT6 498 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 GGA3Q9NZ52 723 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 KIF17Q9P2E2 1029 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 VPS51Q9UID3 782 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 FEM1BQ9UK73 627 aa6.73□□□□□ -1.33
SKP1-213ENST00000524288 TRIAP1O43715 76 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 GLP2RO95838 553 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 ANXA6P08133 673 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 PPP3CBP16298 524 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 UQCRC1P31930 480 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 PDE6CP51160 858 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 AP2B1P63010 937 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 COL10A1Q03692 680 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 SCAPQ12770 1279 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 SPDYE7PQ495Y7 208 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 ICE2Q659A1 982 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 ZNF575Q86XF7 245 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 C2CD5Q86YS7 1000 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 CPEB3Q8NE35 698 aaKnown RBP6.72□□□□□ -1.33
SKP1-213ENST00000524288 SLC30A5Q8TAD4 765 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 FAM136AQ96C01 138 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 C17orf80Q9BSJ5 609 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 TAF1DQ9H5J8 278 aaPredicted RBP6.72□□□□□ -1.33
SKP1-213ENST00000524288 ANAPC4Q9UJX5 808 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 PACSIN3Q9UKS6 424 aa6.72□□□□□ -1.33
SKP1-213ENST00000524288 TRGV11A0A075B6L2 103 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 RNASET2O00584 256 aaKnown RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 PPP6R2O75170 966 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 HLA-DOAP06340 250 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 HNRNPMP52272 730 aaKnown RBP eCLIP6.71□□□□□ -1.341e-11■■■■□ 25
SKP1-213ENST00000524288 FSTL1Q12841 308 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 FHL3Q13643 280 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 ATP1A4Q13733 1029 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 CCNIQ14094 377 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 HLXQ14774 488 aaPredicted RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 P3H1Q32P28 736 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 SLC9A4Q6AI14 798 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 MZT2AQ6P582 158 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 SLC44A2Q8IWA5 706 aaPredicted RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 ABRAQ8N0Z2 381 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 FSTL5Q8N475 847 aaPredicted RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 TEX19Q8NA77 164 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 OSCP1Q8WVF1 389 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 CRAMP1Q96RY5 1269 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 TP63Q9H3D4 680 aaPredicted RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 UNKLQ9H9P5 680 aaKnown RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 PRDM8Q9NQV8 689 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 HELLSQ9NRZ9 838 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 IFT80Q9P2H3 777 aaPredicted RBP6.71□□□□□ -1.34
SKP1-213ENST00000524288 SPATA31A3Q5VYP0 1347 aa6.71□□□□□ -1.34
SKP1-213ENST00000524288 PNMA6EA0A0J9YXQ4 647 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms