RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
SPIDR-222ENST00000524006 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SRRM3A6NNA2 597 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 XPO1O14980 1071 aaKnown RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 DAB1O75553 588 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 STK10O94804 968 aaKnown RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 ABHD2P08910 425 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 FAM163BP0C2L3 166 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 RBP3P10745 1247 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 KLRC2P26717 231 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 IL1R2P27930 398 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 PCSK1P29120 753 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 HOXC8P31273 242 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 CHKAP35790 457 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 ARL4AP40617 200 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 MAGEA4P43358 317 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 PTPN9P43378 593 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 LHX1P48742 406 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SULT1E1P49888 294 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 BCAR1P56945 870 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 NR1H3Q13133 447 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 HIC1Q14526 733 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 OASLQ15646 514 aaKnown RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 PTGISQ16647 500 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 HIF1AQ16665 826 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 XKR4Q5GH76 650 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 PPP6R3Q5H9R7 873 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 C1orf228Q6PIY5 440 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 RHBDF2Q6PJF5 856 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SLC26A9Q7LBE3 791 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 VSIG1Q86XK7 387 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 CRYBG2Q8N1P7 616 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 TRPV1Q8NER1 839 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 TLCD1Q96CP7 247 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 HSFY1Q96LI6 401 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 DDX23Q9BUQ8 820 aaKnown RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-222ENST00000524006 EPN3Q9H201 632 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 PPCSQ9HAB8 311 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 GOLGA2P5Q9HBQ8 144 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 KRT82Q9NSB4 513 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 NINJ2Q9NZG7 142 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 NEU2Q9Y3R4 380 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 VCANP13611 3396 aa11.23□□□□□ -0.61
SPIDR-222ENST00000524006 C3orf70A6NLC5 250 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 H3BRJ5 948 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 MDM4O15151 490 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 GRIN2DO15399 1336 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 ZNF189O75820 626 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 CABYRO75952 493 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 FBXO21O94952 628 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 PFKMP08237 780 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 NPR3P17342 541 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 RPL9P32969 192 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 CCT5P48643 541 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 HNRNPH2P55795 449 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 LILRA4P59901 499 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 RNASELQ05823 741 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 ADIGQ0VDE8 80 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 NOMO1Q15155 1222 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 MDH1BQ5I0G3 518 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 MFSD5Q6N075 450 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 RNF180Q86T96 592 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 TAX1BP1Q86VP1 789 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 NLRC5Q86WI3 1866 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 ATP11CQ8NB49 1132 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 SLC35B2Q8TB61 432 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 SLC35F5Q8WV83 523 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 PEBP4Q96S96 227 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 GAD1Q99259 594 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 ZNF670Q9BS34 389 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 DHX35Q9H5Z1 703 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
SPIDR-222ENST00000524006 RNF19AQ9NV58 838 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 NKIRAS1Q9NYS0 192 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 PAK5Q9P286 719 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 AP4E1Q9UPM8 1137 aa11.22□□□□□ -0.61
SPIDR-222ENST00000524006 SOX1O00570 391 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms